myRT

myRT report for GCA_002934785.1_ASM293478v1

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Seq: PDVG01000069.1 Klebsiella pneumoniae strain HN523E1II NODE_19_length_102862_cov_30.3553_ID_37, whole genome shotgun sequence (102862 bp)
Overview 1 RT 1: 58212-62060 bp Neighborhood of RT #1 [58212, 62060] HHA RVT-GII INT_Cre_C Feature: gene Location: 58212-58466 bp Feature: domain Description: HHA Location: 58263-58446 bp Feature: domain Description: HHA Location: 58263-58446 bp Feature: gene Location: 58758-58970 bp Feature: gene Location: 59045-60334 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59372-59903 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59372-59903 bp Feature: gene Location: 60541-61677 bp Feature: domain Description: INT_Cre_C Location: 60964-61618 bp Feature: domain Description: INT_Cre_C Location: 60964-61 61 8 bp Feature: gene Location: 61743-62060 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HHA (pfam05321), RVT-GII, INT_Cre_C (cd00799)

Seq: PDVG01000083.1 Klebsiella pneumoniae strain HN523E1II NODE_5_length_304291_cov_39.2668_ID_9, whole genome shotgun sequence (304291 bp)
Overview 1 RT 1: 264636-271505 bp Neighborhood of RT #1 [264636, 271507] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 264636-265364 bp Feature: domain Description: FimC Location: 264684-265347 bp Feature: domain Description: FimC Location: 2 64684-2 65347 bp Feature: gene Location: 265396-268005 bp Feature: domain Description: FimD Location: 265453-267994 bp Feature: domain Description: FimD Location: 2 65453-2 67994 bp Feature: gene Location: 268005-270083 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 268413-268857 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 2 68413-2 68857 bp Feature: gene Location: 270141-270581 bp Feature: domain Description: Integrase_1 Location: 270147-270363 bp Feature: domain Description: Integrase_1 Location: 2 70147-2 70363 bp Feature: gene Location: 270842-271507 bp Feature: domain Description: INT_P4_C Location: 270947-271505 bp Feature: domain Description: INT_P4_C Location: 2 70947-2 71505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)