myRT

myRT report for GCA_002935205.2_ASM293520v2

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Seq: PTFL02000030.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0350 CRK0350_NODE_12.ctg_1, whole genome shotgun sequence (148613 bp)
Overview 1 RT 1: 109770-116638 bp Neighborhood of RT #1 [109770, 116640] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 109770-110498 bp Feature: domain Description: FimC Location: 109818-110481 bp Feature: domain Description: FimC Location: 1 0981 8-1 1 0481 bp Feature: gene Location: 110530-113139 bp Feature: domain Description: FimD Location: 110587-113128 bp Feature: domain Description: FimD Location: 1 1 0587-1 1 31 28 bp Feature: gene Location: 113139-115217 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 113547-113991 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 1 1 3547-1 1 3991 bp Feature: gene Location: 115274-115714 bp Feature: domain Description: Integrase_1 Location: 115280-115496 bp Feature: domain Description: Integrase_1 Location: 1 1 5280-1 1 5496 bp Feature: gene Location: 115975-116640 bp Feature: domain Description: INT_P4_C Location: 116080-116638 bp Feature: domain Description: INT_P4_C Location: 1 1 6080-1 1 6638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: PTFL02000059.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0350 CRK0350_NODE_56.ctg_1, whole genome shotgun sequence (7288 bp)
Overview 1 RT 1: 3675-7216 bp Neighborhood of RT #1 [3675, 7216] InsE PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 3675-3947 bp Feature: domain Description: InsE Location: 3684-3933 bp Feature: domain Description: InsE Location: 3684-3933 bp Feature: gene Location: 4003-4428 bp Feature: domain Description: PHA02517 Location: 4027-4363 bp Feature: domain Description: PHA02 517 Location: 402 7-4363 bp Feature: gene Location: 5020-6543 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5293-6025 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 93-602 5 bp Feature: domain Description: GIIM Note: maturase Location: 6100-6298 bp Feature: domain Description: GIIM Note: maturase Location: 6100-62 98 bp Feature: gene Location: 6708-6866 bp Feature: domain Description: PHA02517 Location: 6711-6831 bp Feature: domain Description: PHA02 517 Location: 6711-6831 bp Feature: gene Location: 7085-7216 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsE (COG2963), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PTFL02000027.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0350 CRK0350_NODE_89.ctg_1, whole genome shotgun sequence (1893 bp)
Overview 1 RT 1: 60-1892 bp Neighborhood of RT #1 [60, 1892] RVT-GII Feature: gene Location: 60-1547 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 465-1155 bp Feature: gene Location: 1701-1892 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII