myRT

myRT report for GCA_002935325.2_ASM293532v2

Download annotations/find similar RTs

Seq: PTFS02000113.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0357 CRK0357_NODE_5.ctg_1, whole genome shotgun sequence (283668 bp)
Overview 1 RT 1: 45242-52416 bp Neighborhood of RT #1 [45242, 52433] EAL RVT-UG4 FimD FimC Feature: gene Location: 45242-45448 bp Feature: gene Location: 45538-46392 bp Feature: domain Description: EAL Location: 46222-46375 bp Feature: domain Description: EAL Location: 46222-46375 bp Feature: gene Location: 47034-49064 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47442-47886 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 47442-47886 bp Feature: gene Location: 49064-51673 bp Feature: domain Description: FimD Location: 49121-51662 bp Feature: domain Description: FimD Location: 491 21 -51 662 bp Feature: gene Location: 51705-52433 bp Feature: domain Description: FimC Location: 51753-52416 bp Feature: domain Description: FimC Location: 51 753-5241 6 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EAL (smart00052), RVT-UG4, FimD (COG3188), FimC (COG3121)

Seq: PTFS02000132.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0357 CRK0357_NODE_53.ctg_1, whole genome shotgun sequence (13969 bp)
Overview 1 RT 1: 7793-13136 bp Neighborhood of RT #1 [7793, 13273] umuC PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 7793-9064 bp Feature: domain Description: umuC Location: 7796-9059 bp Feature: domain Description: umuC Location: 7796-9059 bp Feature: gene Location: 9064-9738 bp Feature: domain Description: PRK10276 Location: 9316-9724 bp Feature: domain Description: PRK102 76 Location: 9316-972 4 bp Feature: gene Location: 9892-11379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10297-10987 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 102 97-10987 bp Feature: gene Location: 11628-12599 bp Feature: domain Description: StbA Location: 11631-12576 bp Feature: domain Description: StbA Location: 11631-12 576 bp Feature: gene Location: 12602-13273 bp Feature: domain Description: Plasmid_stab_B Location: 12617-12824 bp Feature: domain Description: Plasmid_stab_B Location: 12 617-12 82 4 bp Feature: domain Description: Plasmid_stab_B Location: 12929-13136 bp Feature: domain Description: Plasmid_stab_B Location: 12 92 9-13136 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)