myRT

myRT report for GCA_002936205.2_ASM293620v2

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Seq: PTII02000065.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0328 CRK0328_NODE_35.ctg_1, whole genome shotgun sequence (31060 bp)
Overview 1 RT 1: 46-2162 bp Neighborhood of RT #1 [46, 2170] PHA02517 RVT-GII GIIM PHA02517 InsE Feature: gene Location: 46-246 bp Feature: domain Description: PHA02517 Location: 49-208 bp Feature: domain Description: PHA0251 7 Location: 49-208 bp Feature: gene Location: 369-1124 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477-606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 477-606 bp Feature: domain Description: GIIM Note: maturase Location: 720-900 bp Feature: domain Description: GIIM Note: maturase Location: 720-900 bp Feature: gene Location: 1425-1835 bp Feature: domain Description: PHA02517 Location: 1431-1770 bp Feature: domain Description: PHA0251 7 Location: 1 431 -1 770 bp Feature: gene Location: 1892-2170 bp Feature: domain Description: InsE Location: 1904-2162 bp Feature: domain Description: InsE Location: 1 904-21 62 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388), InsE (COG2963)

Seq: PTII02000005.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0328 CRK0328_NODE_76.ctg_1, whole genome shotgun sequence (1913 bp)
Overview 1 RT 1: 3-1867 bp Neighborhood of RT #1 [3, 1867] COG3950 RVT-Retrons Feature: gene Location: 3-386 bp Feature: domain Description: COG3950 Location: 201-345 bp Feature: domain Description: COG3950 Location: 2 01-345 bp Feature: gene Location: 383-1318 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 485-1085 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 485-1085 bp Feature: gene Location: 1333-1467 bp Feature: gene Location: 1691-1867 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), RVT-Retrons