myRT

myRT report for GCA_002937115.1_ASM293711v1

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Seq: NHRY01000117.1 Rhodopila globiformis strain DSM 161 scaffold0117, whole genome shotgun sequence (3497 bp)
Overview 1 RT 1: 1-3356 bp Neighborhood of RT #1 [1, 3382] DDE_3 RVT-GII Resolvase Recombinase Zn_ribbon_recom Feature: gene Location: 1-390 bp Feature: domain Description: DDE_3 Location: 148-271 bp Feature: domain Description: DDE_3 Location: 1 48-271 bp Feature: gene Location: 423-1277 bp Feature: gene Location: 1149-1883 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437-1851 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 437-1 851 bp Feature: gene Location: 2201-3382 bp Feature: domain Description: Resolvase Location: 2219-2660 bp Feature: domain Description: Resolvase Location: 221 9-2660 bp Feature: domain Description: Recombinase Location: 2747-3110 bp Feature: domain Description: Recombinase Location: 2747-31 1 0 bp Feature: domain Description: Zn_ribbon_recom Location: 3152-3356 bp Feature: domain Description: Zn_ribbon_recom Location: 31 52-3356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408)

Seq: NHRY01000119.1 Rhodopila globiformis strain DSM 161 scaffold0119, whole genome shotgun sequence (6579 bp)
Overview 1 RT 1: 127-3241 bp Neighborhood of RT #1 [127, 3246] RVT-UG12 HTH_XRE YafQ_toxin Feature: gene Location: 127-1788 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 493-931 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 493-931 bp Feature: gene Location: 2089-2511 bp Feature: domain Description: HTH_XRE Location: 2164-2323 bp Feature: domain Description: HTH_XRE Location: 2 164-2 32 3 bp Feature: gene Location: 2974-3246 bp Feature: domain Description: YafQ_toxin Location: 2989-3241 bp Feature: domain Description: YafQ_toxin Location: 2 989-32 41 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, HTH_XRE (smart00530), YafQ_toxin (pfam15738)