myRT

myRT report for GCA_002941095.1_ASM294109v1

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Seq: PTMB01000016.1 Klebsiella pneumoniae strain YH17175 scaffold16, whole genome shotgun sequence (129186 bp)
Overview 1 RT 1: 90208-97076 bp Neighborhood of RT #1 [90208, 97078] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 90208-90936 bp Feature: domain Description: FimC Location: 90256-90919 bp Feature: domain Description: FimC Location: 90256-9091 9 bp Feature: gene Location: 90968-93577 bp Feature: domain Description: FimD Location: 91025-93566 bp Feature: domain Description: FimD Location: 91 025-93566 bp Feature: gene Location: 93577-95655 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 93985-94429 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 93985-94429 bp Feature: gene Location: 95712-96152 bp Feature: domain Description: Integrase_1 Location: 95718-95934 bp Feature: domain Description: Integrase_1 Location: 9571 8-95934 bp Feature: gene Location: 96413-97078 bp Feature: domain Description: INT_P4_C Location: 96518-97076 bp Feature: domain Description: INT_P4_C Location: 9651 8-97076 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: PTMB01000041.1 Klebsiella pneumoniae strain YH17175 scaffold41, whole genome shotgun sequence (35441 bp)
Overview 1 RT 1: 25488-29570 bp Neighborhood of RT #1 [25488, 29707] PRK10276 RVT-GII StbA Plasmid_stab_B Plasmid_stab_B Feature: gene Location: 25488-25919 bp Feature: domain Description: PRK10276 Location: 25539-25902 bp Feature: domain Description: PRK102 76 Location: 2 5539-2 5902 bp Feature: gene Location: 26117-26329 bp Feature: gene Location: 26404-27813 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26731-27421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 6731-2 742 1 bp Feature: gene Location: 28062-29033 bp Feature: domain Description: StbA Location: 28065-29010 bp Feature: domain Description: StbA Location: 2 8065-2 9010 bp Feature: gene Location: 29036-29707 bp Feature: domain Description: Plasmid_stab_B Location: 29051-29258 bp Feature: domain Description: Plasmid_stab_B Location: 2 9051-2 92 58 bp Feature: domain Description: Plasmid_stab_B Location: 29363-29570 bp Feature: domain Description: Plasmid_stab_B Location: 2 9363-2 9570 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII, StbA (pfam06406), Plasmid_stab_B (pfam10784)