myRT

myRT report for GCA_002941405.1_ASM294140v1

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Seq: PTMU01000068.1 Escherichia coli strain YH17167 scaffold68, whole genome shotgun sequence (11337 bp)
Overview 1 RT 1: 4650-11069 bp Neighborhood of RT #1 [4650, 11074] RVT-GII GIIM RAYT PRK11447 Feature: gene Location: 4650-4787 bp Feature: gene Location: 4877-5146 bp Feature: gene Location: 5171-6517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5459-6077 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5459-6077 bp Feature: domain Description: GIIM Note: maturase Location: 6125-6356 bp Feature: domain Description: GIIM Note: maturase Location: 61 25-6356 bp Feature: gene Location: 6673-7212 bp Feature: domain Description: RAYT Location: 6751-7114 bp Feature: domain Description: RAYT Location: 6751 -71 1 4 bp Feature: gene Location: 7559-11074 bp Feature: domain Description: PRK11447 Location: 7562-11069 bp Feature: domain Description: PRK1 1 447 Location: 7562-1 1 069 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), RAYT (COG1943), PRK11447 (cellulose synthase subunit BcsC; Provisional)

Seq: PTMU01000082.1 Escherichia coli strain YH17167 scaffold82, whole genome shotgun sequence (5208 bp)
Overview 1 RT 1: 104-5140 bp Neighborhood of RT #1 [104, 5205] HsdM PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 104-1852 bp Feature: domain Description: HsdM Location: 164-1832 bp Feature: domain Description: HsdM Location: 164-1832 bp Feature: gene Location: 2045-2449 bp Feature: domain Description: PHA02517 Location: 2048-2438 bp Feature: domain Description: PHA02 517 Location: 2 048-2 438 bp Feature: gene Location: 2614-4137 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2887-3619 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 887-3619 bp Feature: domain Description: GIIM Note: maturase Location: 3694-3892 bp Feature: domain Description: GIIM Note: maturase Location: 3694-3892 bp Feature: gene Location: 4091-4516 bp Feature: gene Location: 4729-5205 bp Feature: domain Description: PHA02517 Location: 4804-5140 bp Feature: domain Description: PHA02 517 Location: 4804-5140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)