myRT

myRT report for GCA_002941425.1_ASM294142v1

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Seq: PTMW01000042.1 Escherichia coli strain YH17165 scaffold42, whole genome shotgun sequence (13570 bp)
Overview 1 RT 1: 10050-13495 bp Neighborhood of RT #1 [10050, 13506] PHA02517 RVT-GII GIIM PHA02517 PHA02517 Feature: gene Location: 10050-10178 bp Feature: gene Location: 10226-10507 bp Feature: domain Description: PHA02517 Location: 10232-10442 bp Feature: domain Description: PHA0251 7 Location: 1 0232-1 0442 bp Feature: gene Location: 11099-12622 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11372-12104 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 372-1 21 04 bp Feature: domain Description: GIIM Note: maturase Location: 12179-12377 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 79-1 2377 bp Feature: gene Location: 12739-13185 bp Feature: domain Description: PHA02517 Location: 12742-13183 bp Feature: domain Description: PHA0251 7 Location: 1 2742-1 31 83 bp Feature: gene Location: 13333-13506 bp Feature: domain Description: PHA02517 Location: 13357-13495 bp Feature: domain Description: PHA0251 7 Location: 1 3357-1 3495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: PTMW01000009.1 Escherichia coli strain YH17165 scaffold9, whole genome shotgun sequence (138208 bp)
Overview 1 RT 1: 49392-53274 bp Neighborhood of RT #1 [49392, 53279] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49392-49850 bp Feature: domain Description: dut Location: 49398-49845 bp Feature: domain Description: dut Location: 49398-49845 bp Feature: gene Location: 49957-50553 bp Feature: domain Description: slmA Location: 49963-50539 bp Feature: domain Description: slmA Location: 49963-50539 bp Feature: gene Location: 50599-51558 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50734-51283 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50734-512 83 bp Feature: gene Location: 51856-52512 bp Feature: domain Description: pyrE Location: 51874-52507 bp Feature: domain Description: pyrE Location: 51874-52 507 bp Feature: gene Location: 52563-53279 bp Feature: domain Description: rph Location: 52566-53274 bp Feature: domain Description: rph Location: 52 566-532 74 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)

Seq: PTMW01000098.1 Escherichia coli strain YH17165 scaffold98, whole genome shotgun sequence (722 bp)
Overview 1 RT 1: 2-281 bp Neighborhood of RT #1 [2, 292] RVT-GII Feature: gene Location: 2-292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173-281 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 173 -281 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII