myRT

myRT report for GCA_002941485.1_ASM294148v1

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Seq: PTMY01000002.1 Escherichia coli strain YH17162 scaffold2, whole genome shotgun sequence (432560 bp)
Overview 1 RT 1: 417695-420108 bp Neighborhood of RT #1 [417695, 420182] PHA02517 HTH_Tnp_1 RVT-GII RVT-GII group_II_RT_mat IS285 Feature: gene Location: 417695-418408 bp Feature: domain Description: PHA02517 Location: 417713-418397 bp Feature: domain Description: PHA0251 7 Location: 41 771 3-41 8397 bp Feature: gene Location: 418667-418840 bp Feature: domain Description: HTH_Tnp_1 Location: 418676-418829 bp Feature: domain Description: HTH_Tnp_1 Location: 41 8676-41 8829 bp Feature: gene Location: 418879-419082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 418924-419080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 8924-41 9080 bp Feature: gene Location: 419116-419352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 419119-419302 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 91 1 9-41 9302 bp Feature: gene Location: 419345-419557 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 419348-419546 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 41 9348-41 9546 bp Feature: gene Location: 419700-420182 bp Feature: domain Description: IS285 Location: 419730-420108 bp Feature: domain Description: IS285 Location: 41 9730-4201 08 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), HTH_Tnp_1 (pfam01527), RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)