myRT

myRT report for GCA_002944985.1_ASM294498v1

Download annotations/find similar RTs

Seq: PTVF01000022.1 Enterococcus faecalis strain CVM N59910F N59910F_S26_L001_R1_001_contig_22, whole genome shotgun sequence (50248 bp)
Overview 1 RT 1: 15316-20258 bp 2 RT 2: 31460-40243 bp Neighborhood of RT #1 [15316, 20278] Sipho_Gp157 PRK07983 RVT-GII GIIM DUF4373 DnaD_dom RusA Neighborhood of RT #2 [31460, 40320] TraC-F-type Phage_lysozyme2 PRK08581 RVT-GII phage_LysB TRX_family Feature: gene Location: 15316-15795 bp Feature: domain Description: Sipho_Gp157 Location: 15325-15793 bp Feature: domain Description: Sipho_Gp1 57 Location: 1 5325-1 5793 bp Feature: gene Location: 15808-16791 bp Feature: domain Description: PRK07983 Location: 16120-16462 bp Feature: domain Description: PRK07983 Location: 1 61 20-1 6462 bp Feature: gene Location: 17381-18703 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17681-18317 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7681 -1 831 7 bp Feature: domain Description: GIIM Note: maturase Location: 18389-18605 bp Feature: domain Description: GIIM Note: maturase Location: 1 8389-1 8605 bp Feature: gene Location: 18885-19715 bp Feature: domain Description: DUF4373 Location: 18918-19197 bp Feature: domain Description: DUF4373 Location: 1 891 8-1 91 97 bp Feature: domain Description: DnaD_dom Location: 19464-19668 bp Feature: domain Description: DnaD_dom Location: 1 9464-1 9668 bp Feature: gene Location: 20129-20278 bp Feature: domain Description: RusA Location: 20132-20258 bp Feature: domain Description: RusA Location: 201 32-20258 bp Feature: gene Location: 31460-33850 bp Feature: domain Description: TraC-F-type Location: 31880-33674 bp Feature: domain Description: TraC-F-type Location: 31 880-33674 bp Feature: gene Location: 33862-36375 bp Feature: domain Description: Phage_lysozyme2 Location: 35494-36019 bp Feature: domain Description: Phage_lysozyme2 Location: 35494-3601 9 bp Feature: domain Description: PRK08581 Location: 36139-36358 bp Feature: domain Description: PRK08581 Location: 361 39-36358 bp Feature: gene Location: 37099-39033 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37423-38158 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37423-381 58 bp Feature: gene Location: 39303-39920 bp Feature: domain Description: phage_LysB Location: 39348-39519 bp Feature: domain Description: phage_LysB Location: 39348-3951 9 bp Feature: gene Location: 39904-40320 bp Feature: domain Description: TRX_family Location: 40051-40243 bp Feature: domain Description: TRX_family Location: 40051 -40243 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Sipho_Gp157 (pfam05565), PRK07983 (exodeoxyribonuclease X; Provisional), RVT-GII, GIIM (pfam08388), DUF4373 (pfam14297), DnaD_dom (TIGR01446), RusA (pfam05866), TraC-F-type (TIGR02746), Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein)
phage_LysB (TIGR03495), TRX_family (cd02947)

Seq: PTVF01000035.1 Enterococcus faecalis strain CVM N59910F N59910F_S26_L001_R1_001_contig_35, whole genome shotgun sequence (101862 bp)
Overview 1 RT 1: 14799-20558 bp Neighborhood of RT #1 [14799, 20560] BRR2 RVT-UNC YczE PRK08936 Feature: gene Location: 14799-16556 bp Feature: domain Description: BRR2 Location: 15033-16119 bp Feature: domain Description: BRR2 Location: 15033-16119 bp Feature: gene Location: 16679-16945 bp Feature: gene Location: 16964-18676 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17351-17798 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17351-17798 bp Feature: gene Location: 19094-19696 bp Feature: domain Description: YczE Location: 19103-19688 bp Feature: domain Description: YczE Location: 19103-19688 bp Feature: gene Location: 19781-20560 bp Feature: domain Description: PRK08936 Location: 19784-20558 bp Feature: domain Description: PRK08936 Location: 19784-2 0558 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BRR2 (COG1204), RVT-UG8/RVT-UG12(RVT-UNC), YczE (COG2364), PRK08936 (glucose-1-dehydrogenase; Provisional)