myRT

myRT report for GCA_002945625.1_ASM294562v1

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Seq: PTWK01000010.1 Enterococcus faecalis strain CVM N59550F N59550F_S41_L001_R1_001_contig_10, whole genome shotgun sequence (101862 bp)
Overview 1 RT 1: 81303-86627 bp Neighborhood of RT #1 [81303, 87064] PRK08936 YczE RVT-UNC BRR2 Feature: gene Location: 81303-82082 bp Feature: domain Description: PRK08936 Location: 81306-82080 bp Feature: domain Description: PRK08936 Location: 81 306-82080 bp Feature: gene Location: 82167-82769 bp Feature: domain Description: YczE Location: 82176-82761 bp Feature: domain Description: YczE Location: 821 76-82761 bp Feature: gene Location: 83187-84899 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 83574-84021 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 83574-84021 bp Feature: gene Location: 84918-85184 bp Feature: gene Location: 85307-87064 bp Feature: domain Description: BRR2 Location: 85541-86627 bp Feature: domain Description: BRR2 Location: 85541 -86627 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK08936 (glucose-1-dehydrogenase; Provisional), YczE (COG2364), RVT-UG8/RVT-UG12(RVT-UNC), BRR2 (COG1204)

Seq: PTWK01000071.1 Enterococcus faecalis strain CVM N59550F N59550F_S41_L001_R1_001_contig_71, whole genome shotgun sequence (50181 bp)
Overview 1 RT 1: 9862-18546 bp 2 RT 2: 29904-34864 bp Neighborhood of RT #1 [9862, 18722] TRX_family phage_LysB RVT-GII Phage_lysozyme2 PRK08581 TraC-F-type Neighborhood of RT #2 [29904, 34866] RusA DUF4373 DnaD_dom RVT-GII GIIM PRK07983 Sipho_Gp157 Feature: gene Location: 9862-10278 bp Feature: domain Description: TRX_family Location: 10009-10201 bp Feature: domain Description: TRX_family Location: 10009-102 01 bp Feature: gene Location: 10262-10879 bp Feature: domain Description: phage_LysB Location: 10307-10478 bp Feature: domain Description: phage_LysB Location: 10307-10478 bp Feature: gene Location: 11149-13083 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11473-12208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11473-12 2 08 bp Feature: gene Location: 13807-16320 bp Feature: domain Description: Phage_lysozyme2 Location: 15439-15964 bp Feature: domain Description: Phage_lysozyme2 Location: 15439-15964 bp Feature: domain Description: PRK08581 Location: 16084-16303 bp Feature: domain Description: PRK08581 Location: 16084-16303 bp Feature: gene Location: 16332-18722 bp Feature: domain Description: TraC-F-type Location: 16752-18546 bp Feature: domain Description: TraC-F-type Location: 16752 -18546 bp Feature: gene Location: 29904-30053 bp Feature: domain Description: RusA Location: 29907-30033 bp Feature: domain Description: RusA Location: 2 9907-30033 bp Feature: gene Location: 30467-31297 bp Feature: domain Description: DUF4373 Location: 30500-30779 bp Feature: domain Description: DUF4373 Location: 30500-30779 bp Feature: domain Description: DnaD_dom Location: 31046-31250 bp Feature: domain Description: DnaD_dom Location: 31046-312 50 bp Feature: gene Location: 31479-32801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31779-32415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31779-32 415 bp Feature: domain Description: GIIM Note: maturase Location: 32487-32703 bp Feature: domain Description: GIIM Note: maturase Location: 32 487-32 703 bp Feature: gene Location: 33391-34374 bp Feature: domain Description: PRK07983 Location: 33703-34045 bp Feature: domain Description: PRK07983 Location: 33703-34045 bp Feature: gene Location: 34387-34866 bp Feature: domain Description: Sipho_Gp157 Location: 34396-34864 bp Feature: domain Description: Sipho_Gp157 Location: 34396-34864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_family (cd02947), phage_LysB (TIGR03495), RVT-GII, Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746), RusA (pfam05866), DUF4373 (pfam14297), DnaD_dom (TIGR01446), GIIM (pfam08388)
PRK07983 (exodeoxyribonuclease X; Provisional), Sipho_Gp157 (pfam05565)