myRT

myRT report for GCA_002945715.1_ASM294571v1

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Seq: PTWR01000005.1 Enterococcus faecalis strain CVM N59509F N59509F_S4_L001_R1_001_contig_5, whole genome shotgun sequence (101858 bp)
Overview 1 RT 1: 14795-20554 bp Neighborhood of RT #1 [14795, 20556] BRR2 RVT-UNC YczE PRK08936 Feature: gene Location: 14795-16552 bp Feature: domain Description: BRR2 Location: 15029-16115 bp Feature: domain Description: BRR2 Location: 1 5029-1 61 1 5 bp Feature: gene Location: 16675-16941 bp Feature: gene Location: 16960-18672 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 17347-17794 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 1 7347-1 7794 bp Feature: gene Location: 19090-19692 bp Feature: domain Description: YczE Location: 19099-19684 bp Feature: domain Description: YczE Location: 1 9099-1 9684 bp Feature: gene Location: 19777-20556 bp Feature: domain Description: PRK08936 Location: 19780-20554 bp Feature: domain Description: PRK08936 Location: 1 9780-20554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT BRR2 (COG1204), RVT-UG8/RVT-UG12(RVT-UNC), YczE (COG2364), PRK08936 (glucose-1-dehydrogenase; Provisional)

Seq: PTWR01000060.1 Enterococcus faecalis strain CVM N59509F N59509F_S4_L001_R1_001_contig_60, whole genome shotgun sequence (50248 bp)
Overview 1 RT 1: 9929-18613 bp 2 RT 2: 29971-34931 bp Neighborhood of RT #1 [9929, 18789] TRX_family phage_LysB RVT-GII Phage_lysozyme2 PRK08581 TraC-F-type Neighborhood of RT #2 [29971, 34933] RusA DUF4373 DnaD_dom RVT-GII GIIM PRK07983 Sipho_Gp157 Feature: gene Location: 9929-10345 bp Feature: domain Description: TRX_family Location: 10076-10268 bp Feature: domain Description: TRX_family Location: 10076-102 68 bp Feature: gene Location: 10329-10946 bp Feature: domain Description: phage_LysB Location: 10374-10545 bp Feature: domain Description: phage_LysB Location: 10374-10545 bp Feature: gene Location: 11216-13150 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11540-12275 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11540-12 2 75 bp Feature: gene Location: 13874-16387 bp Feature: domain Description: Phage_lysozyme2 Location: 15506-16031 bp Feature: domain Description: Phage_lysozyme2 Location: 15506-16031 bp Feature: domain Description: PRK08581 Location: 16151-16370 bp Feature: domain Description: PRK08581 Location: 16151-16370 bp Feature: gene Location: 16399-18789 bp Feature: domain Description: TraC-F-type Location: 16819-18613 bp Feature: domain Description: TraC-F-type Location: 16819-18613 bp Feature: gene Location: 29971-30120 bp Feature: domain Description: RusA Location: 29974-30100 bp Feature: domain Description: RusA Location: 2 9974-30100 bp Feature: gene Location: 30534-31364 bp Feature: domain Description: DUF4373 Location: 30567-30846 bp Feature: domain Description: DUF4373 Location: 30567-30846 bp Feature: domain Description: DnaD_dom Location: 31113-31317 bp Feature: domain Description: DnaD_dom Location: 31113-31317 bp Feature: gene Location: 31546-32868 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31846-32482 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31846-32 482 bp Feature: domain Description: GIIM Note: maturase Location: 32554-32770 bp Feature: domain Description: GIIM Note: maturase Location: 32 554-32 770 bp Feature: gene Location: 33458-34441 bp Feature: domain Description: PRK07983 Location: 33770-34112 bp Feature: domain Description: PRK07983 Location: 33770-34112 bp Feature: gene Location: 34454-34933 bp Feature: domain Description: Sipho_Gp157 Location: 34463-34931 bp Feature: domain Description: Sipho_Gp157 Location: 34463-34931 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TRX_family (cd02947), phage_LysB (TIGR03495), RVT-GII, Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746), RusA (pfam05866), DUF4373 (pfam14297), DnaD_dom (TIGR01446), GIIM (pfam08388)
PRK07983 (exodeoxyribonuclease X; Provisional), Sipho_Gp157 (pfam05565)