myRT

myRT report for GCA_002948435.1_ASM294843v1

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Seq: PTYP01000015.1 Enterococcus faecalis strain CVM N53457 N53457_S19_L001_R1_001_contig_15, whole genome shotgun sequence (87702 bp)
Overview 1 RT 1: 1042-5182 bp Neighborhood of RT #1 [1042, 5511] RusA DUF4373 DnaD_dom RVT-GII GIIM PRK07983 Feature: gene Location: 1042-1191 bp Feature: domain Description: RusA Location: 1045-1171 bp Feature: domain Description: RusA Location: 1 045-1 1 71 bp Feature: gene Location: 1466-2434 bp Feature: domain Description: DUF4373 Location: 1499-1778 bp Feature: domain Description: DUF4373 Location: 1 499-1 778 bp Feature: domain Description: DnaD_dom Location: 2045-2249 bp Feature: domain Description: DnaD_dom Location: 2045-2249 bp Feature: gene Location: 2616-3938 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2916-3552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 291 6-3552 bp Feature: domain Description: GIIM Note: maturase Location: 3624-3840 bp Feature: domain Description: GIIM Note: maturase Location: 3624-3840 bp Feature: gene Location: 4194-4364 bp Feature: gene Location: 4528-5511 bp Feature: domain Description: PRK07983 Location: 4840-5182 bp Feature: domain Description: PRK07983 Location: 4840-51 82 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RusA (pfam05866), DUF4373 (pfam14297), DnaD_dom (TIGR01446), RVT-GII, GIIM (pfam08388), PRK07983 (exodeoxyribonuclease X; Provisional)

Seq: PTYP01000002.1 Enterococcus faecalis strain CVM N53457 N53457_S19_L001_R1_001_contig_2, whole genome shotgun sequence (127680 bp)
Overview 1 RT 1: 39687-46410 bp Neighborhood of RT #1 [39687, 46412] DUF1837 BRR2 RVT-UNC YczE PRK08936 Feature: gene Location: 39687-40640 bp Feature: domain Description: DUF1837 Location: 39807-40572 bp Feature: domain Description: DUF1837 Location: 39807-40572 bp Feature: gene Location: 40647-42797 bp Feature: domain Description: BRR2 Location: 40881-41970 bp Feature: domain Description: BRR2 Location: 40881-41970 bp Feature: gene Location: 42816-44528 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 43203-43650 bp Feature: RT Description: RVT-UNC Note: UNC RT Location: 432 03-43650 bp Feature: gene Location: 44946-45548 bp Feature: domain Description: YczE Location: 44955-45540 bp Feature: domain Description: YczE Location: 44955-45540 bp Feature: gene Location: 45633-46412 bp Feature: domain Description: PRK08936 Location: 45636-46410 bp Feature: domain Description: PRK08936 Location: 45636-46410 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1837 (pfam08878), BRR2 (COG1204), RVT-UG8/RVT-UG12(RVT-UNC), YczE (COG2364), PRK08936 (glucose-1-dehydrogenase; Provisional)

Seq: PTYP01000056.1 Enterococcus faecalis strain CVM N53457 N53457_S19_L001_R1_001_contig_56, whole genome shotgun sequence (24522 bp)
Overview 1 RT 1: 5664-14192 bp Neighborhood of RT #1 [5664, 14368] DHR10 RVT-GII Phage_lysozyme2 PRK08581 TraC-F-type Feature: gene Location: 5664-5909 bp Feature: domain Description: DHR10 Location: 5676-5793 bp Feature: domain Description: DHR10 Location: 5676-5793 bp Feature: gene Location: 5896-6522 bp Feature: gene Location: 6795-8729 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7119-7854 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7119-7854 bp Feature: gene Location: 9453-11966 bp Feature: domain Description: Phage_lysozyme2 Location: 11085-11610 bp Feature: domain Description: Phage_lysozyme2 Location: 11085-11610 bp Feature: domain Description: PRK08581 Location: 11730-11949 bp Feature: domain Description: PRK08581 Location: 1173 0-11949 bp Feature: gene Location: 11978-14368 bp Feature: domain Description: TraC-F-type Location: 12398-14192 bp Feature: domain Description: TraC-F-type Location: 123 98-14192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DHR10 (pfam18595), RVT-GII, Phage_lysozyme2 (pfam18013), PRK08581 (amidase domain-containing protein), TraC-F-type (TIGR02746)