myRT

myRT report for GCA_002949295.1_ASM294929v1

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Seq: PTXU01000001.1 Escherichia coli strain CowEC636 contig000001, whole genome shotgun sequence (339612 bp)
Overview 1 RT 1: 309355-313546 bp Neighborhood of RT #1 [309355, 313632] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C RVT-GII GIIM RVT-GII CdiI_3 Feature: gene Location: 309355-309702 bp Feature: domain Description: TnpB_IS66 Location: 309382-309673 bp Feature: domain Description: TnpB_IS66 Location: 309382-309673 bp Feature: gene Location: 309722-311293 bp Feature: domain Description: LZ_Tnp_IS66 Location: 309860-310085 bp Feature: domain Description: LZ_Tnp_IS66 Location: 309860-31 0085 bp Feature: domain Description: zf-IS66 Location: 310106-310238 bp Feature: domain Description: zf-IS66 Location: 31 01 06-31 0238 bp Feature: domain Description: DDE_Tnp_IS66 Location: 310283-311138 bp Feature: domain Description: DDE_Tnp_IS66 Location: 31 0283-31 1 1 38 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 311159-311270 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 31 1 1 59-31 1 270 bp Feature: gene Location: 311507-312277 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 311510-311924 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 1 51 0-31 1 924 bp Feature: domain Description: GIIM Note: maturase Location: 311975-312140 bp Feature: domain Description: GIIM Note: maturase Location: 31 1 975-31 21 40 bp Feature: gene Location: 312316-312798 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 312637-312724 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 2637-31 2724 bp Feature: gene Location: 312781-313245 bp Feature: gene Location: 313246-313632 bp Feature: domain Description: CdiI_3 Location: 313270-313546 bp Feature: domain Description: CdiI_3 Location: 31 3270-31 3546 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), CdiI_3 (pfam18616)