myRT

myRT report for GCA_002954445.1_ASM295444v1

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Seq: MQWA01000001.1 Rubritalea profundi strain SAORIC-165 scaffold00001, whole genome shotgun sequence (4159517 bp)
Overview 1 RT 1: 2699214-2704511 bp 2 RT 2: 2715505-2723023 bp Neighborhood of RT #1 [2699214, 2704597] pfam03781 PEP-CTERM Avd_like RVT-DGRs RosB RosB TrkA_N Neighborhood of RT #2 [2715505, 2723037] KOG0399 RVT-Retrons PLPDE_III_YBL036c_like DUF971 Feature: gene Location: 2699214-2700143 bp Feature: domain Description: pfam03781 Location: 2699466-2700057 bp Feature: domain Description: pfam03781 Location: 2699466-2700057 bp Feature: domain Description: PEP-CTERM Location: 2700069-2700135 bp Feature: domain Description: PEP-CTERM Location: 2700069-27001 35 bp Feature: gene Location: 2700264-2700623 bp Feature: domain Description: Avd_like Location: 2700303-2700612 bp Feature: domain Description: Avd_like Location: 2700303-270061 2 bp Feature: gene Location: 2700671-2701660 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2700830-2701466 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2700830-2701 466 bp Feature: gene Location: 2702209-2702895 bp Feature: gene Location: 2702918-2704597 bp Feature: domain Description: RosB Location: 2703011-2703503 bp Feature: domain Description: RosB Location: 270301 1 -2703503 bp Feature: domain Description: RosB Location: 2703506-2704121 bp Feature: domain Description: RosB Location: 2703506-27041 21 bp Feature: domain Description: TrkA_N Location: 2704175-2704511 bp Feature: domain Description: TrkA_N Location: 27041 75-270451 1 bp Feature: gene Location: 2715505-2720115 bp Feature: domain Description: KOG0399 Location: 2715556-2720095 bp Feature: domain Description: KOG0399 Location: 271 5556-2720095 bp Feature: gene Location: 2720367-2720618 bp Feature: gene Location: 2720675-2721646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2721104-2721401 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2721 1 04-2721 401 bp Feature: gene Location: 2721852-2722595 bp Feature: domain Description: PLPDE_III_YBL036c_like Location: 2721918-2722575 bp Feature: domain Description: PLPDE_III_YBL036c_like Location: 2721 91 8-2722575 bp Feature: gene Location: 2722741-2723037 bp Feature: domain Description: DUF971 Location: 2722774-2723023 bp Feature: domain Description: DUF971 Location: 2722774-2723023 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), PEP-CTERM, Avd_like (cd16376), RVT-DGRs, RosB (COG4651), TrkA_N (pfam02254), KOG0399 (KOG0399, Glutamate synthase ), RVT-Retrons, PLPDE_III_YBL036c_like (cd00635), DUF971 (pfam06155)