myRT

myRT report for GCA_002954615.1_ASM295461v1

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Seq: MSCJ01000001.1 Photobacterium angustum strain LC1-200 chromosome c1 LC1_200_chr1_contig1, whole genome shotgun sequence (2977068 bp)
Overview 1 RT 1: 1202777-1209763 bp Neighborhood of RT #1 [1202777, 1209763] SbcB YbjD YbjD RVT-Retrons Feature: gene Location: 1202777-1204198 bp Feature: domain Description: SbcB Location: 1202783-1204196 bp Feature: domain Description: SbcB Location: 1 202783-1 2041 96 bp Feature: gene Location: 1204781-1207036 bp Feature: domain Description: YbjD Location: 1204799-1204943 bp Feature: domain Description: YbjD Location: 1 204799-1 204943 bp Feature: domain Description: YbjD Location: 1205483-1205993 bp Feature: domain Description: YbjD Location: 1 205483-1 205993 bp Feature: gene Location: 1207173-1208354 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1207326-1207965 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 207326-1 207965 bp Feature: gene Location: 1208978-1209166 bp Feature: gene Location: 1209428-1209763 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SbcB (COG2925), YbjD (COG3593), RVT-Retrons

Seq: MSCJ01000003.1 Photobacterium angustum strain LC1-200 chromosome c2 LC1_200_chr2, whole genome shotgun sequence (1623367 bp)
Overview 1 RT 1: 320800-324175 bp Neighborhood of RT #1 [320800, 324175] HTH_XRE RVT-UG2 Feature: gene Location: 320800-321078 bp Feature: gene Location: 321129-321434 bp Feature: domain Description: HTH_XRE Location: 321162-321324 bp Feature: domain Description: HTH_XRE Location: 32 1162 -32 132 4 bp Feature: gene Location: 321574-322884 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 321775-322588 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 32 1775-32 2 588 bp Feature: gene Location: 323017-323148 bp Feature: gene Location: 323231-324175 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-UG2