myRT

myRT report for GCA_002959375.1_ASM295937v1

Download annotations/find similar RTs

Seq: PUDY01000016.1 Escherichia coli strain YH17133 scaffold_15, whole genome shotgun sequence (72782 bp)
Overview 1 RT 1: 2-2860 bp Neighborhood of RT #1 [2, 2865] Caudo_TAP RVT-UG17 SLATT_5 PRK10597 Feature: gene Location: 2-382 bp Feature: domain Description: Caudo_TAP Location: 14-371 bp Feature: domain Description: Caudo_TAP Location: 1 4-371 bp Feature: gene Location: 495-1865 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 723-1329 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 723-1 329 bp Feature: gene Location: 1843-2394 bp Feature: domain Description: SLATT_5 Location: 1849-2365 bp Feature: domain Description: SLATT_5 Location: 1 849-2365 bp Feature: gene Location: 2617-2865 bp Feature: domain Description: PRK10597 Location: 2620-2860 bp Feature: domain Description: PRK1 0597 Location: 2620-2860 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Caudo_TAP (pfam02413), RVT-UG17, SLATT_5 (pfam18160), PRK10597 (DNA damage-inducible protein I; Provisional)

Seq: PUDY01000164.1 Escherichia coli strain YH17133 scaffold_163, whole genome shotgun sequence (2785 bp)
Overview 1 RT 1: 2-2643 bp Neighborhood of RT #1 [2, 2643] PHA02517 RVT-GII GIIM Feature: gene Location: 2-208 bp Feature: domain Description: PHA02517 Location: 5-209 bp Feature: domain Description: PHA02 517 Location: 5-2 09 bp Feature: gene Location: 373-1761 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-1378 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 646-1378 bp Feature: domain Description: GIIM Note: maturase Location: 1453-1651 bp Feature: domain Description: GIIM Note: maturase Location: 1453-1651 bp Feature: gene Location: 2055-2435 bp Feature: gene Location: 2461-2643 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)