myRT

myRT report for GCA_002960355.1_ASM296035v1

Download annotations/find similar RTs

Seq: POIY01000051.1 Streptococcus suis strain 2261 SS_2261_Contig51, whole genome shotgun sequence (29366 bp)
Overview 1 RT 1: 21697-26941 bp Neighborhood of RT #1 [21697, 26976] gltX RVT-GII GIIM HTH_MerR-like Nudix_Hydrolase_34 Feature: gene Location: 21697-22140 bp Feature: gene Location: 22259-23764 bp Feature: domain Description: gltX Location: 22316-23750 bp Feature: domain Description: gltX Location: 2231 6-23750 bp Feature: gene Location: 24432-25709 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24636-25251 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 24636-25251 bp Feature: domain Description: GIIM Note: maturase Location: 25305-25518 bp Feature: domain Description: GIIM Note: maturase Location: 25305-2551 8 bp Feature: gene Location: 25774-26136 bp Feature: domain Description: HTH_MerR-like Location: 25777-26131 bp Feature: domain Description: HTH_MerR-like Location: 25777-261 31 bp Feature: gene Location: 26482-26976 bp Feature: domain Description: Nudix_Hydrolase_34 Location: 26578-26941 bp Feature: domain Description: Nudix_Hydrolase_34 Location: 26578-26941 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT gltX (PRK14895), RVT-GII, GIIM (pfam08388), HTH_MerR-like (cd00592), Nudix_Hydrolase_34 (cd04693)

Seq: POIY01000061.1 Streptococcus suis strain 2261 SS_2261_Contig61, whole genome shotgun sequence (41851 bp)
Overview 1 RT 1: 20243-25944 bp Neighborhood of RT #1 [20243, 25961] PRK00885 SLATT_5 RVT-AbiA purH purN Feature: gene Location: 20243-21505 bp Feature: domain Description: PRK00885 Location: 20246-21500 bp Feature: domain Description: PRK00885 Location: 2 02 46-2 1500 bp Feature: gene Location: 21698-22255 bp Feature: domain Description: SLATT_5 Location: 21719-22223 bp Feature: domain Description: SLATT_5 Location: 2 1719-2 2 2 2 3 bp Feature: gene Location: 22274-23752 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 22652-23138 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 2 2 652 -2 3138 bp Feature: gene Location: 23853-25400 bp Feature: domain Description: purH Location: 23856-25398 bp Feature: domain Description: purH Location: 2 3856-2 5398 bp Feature: gene Location: 25410-25961 bp Feature: domain Description: purN Location: 25413-25944 bp Feature: domain Description: purN Location: 2 5413-2 5944 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00885 (phosphoribosylamine--glycine ligase; Provisional), SLATT_5 (pfam18160), RVT-AbiA, purH (TIGR00355), purN (PRK05647)