myRT

myRT report for GCA_002960495.1_ASM296049v1

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Seq: POJF01000011.1 Streptococcus suis strain 2214 SS_2214_Contig11, whole genome shotgun sequence (56111 bp)
Overview 1 RT 1: 30214-39484 bp Neighborhood of RT #1 [30214, 39492] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF TnpV Feature: gene Location: 30214-30765 bp Feature: gene Location: 30815-36256 bp Feature: domain Description: N6_Mtase Location: 32807-33398 bp Feature: domain Description: N6_Mtase Location: 32807-33398 bp Feature: domain Description: COG4646 Location: 33989-36113 bp Feature: domain Description: COG4646 Location: 33989-361 1 3 bp Feature: gene Location: 36754-38532 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37015-37807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3701 5-37807 bp Feature: domain Description: Intron_maturas2 Location: 37912-38143 bp Feature: domain Description: Intron_maturas2 Location: 3791 2-381 43 bp Feature: domain Description: HNHc Note: nucleases Location: 38308-38494 bp Feature: domain Description: HNHc Note: nucleases Location: 38308-38494 bp Feature: gene Location: 38670-39137 bp Feature: domain Description: SF2_C_SNF Location: 38913-39060 bp Feature: domain Description: SF2_C_SNF Location: 3891 3-39060 bp Feature: gene Location: 39118-39492 bp Feature: domain Description: TnpV Location: 39154-39484 bp Feature: domain Description: TnpV Location: 391 54-39484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), TnpV (pfam14198)

Seq: POJF01000035.1 Streptococcus suis strain 2214 SS_2214_Contig35, whole genome shotgun sequence (53249 bp)
Overview 1 RT 1: 15736-22003 bp Neighborhood of RT #1 [15736, 22023] valS RVT-Retrons RAYT Feature: gene Location: 15736-18384 bp Feature: domain Description: valS Location: 15742-18370 bp Feature: domain Description: valS Location: 15742 -18370 bp Feature: gene Location: 18472-19797 bp Feature: gene Location: 20025-20960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20139-20700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0139-2 0700 bp Feature: gene Location: 21337-21492 bp Feature: gene Location: 21604-22023 bp Feature: domain Description: RAYT Location: 21625-22003 bp Feature: domain Description: RAYT Location: 2 162 5-2 2 003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT valS (TIGR00422), RVT-Retrons, RAYT (COG1943)