myRT

myRT report for GCA_002961055.1_ASM296105v1

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Seq: POKP01000175.1 Streptococcus suis strain 1367 SS_1367_Contig175, whole genome shotgun sequence (14769 bp)
Overview 1 RT 1: 1196-11495 bp Neighborhood of RT #1 [1196, 11495] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 1196-1747 bp Feature: gene Location: 1797-7697 bp Feature: domain Description: N6_Mtase Location: 3807-4398 bp Feature: domain Description: N6_Mtase Location: 3807-4398 bp Feature: domain Description: COG4646 Location: 4992-7293 bp Feature: domain Description: COG4646 Location: 4992-7293 bp Feature: gene Location: 8262-10073 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8526-9348 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8526-9348 bp Feature: domain Description: Intron_maturas2 Location: 9417-9891 bp Feature: domain Description: Intron_maturas2 Location: 941 7-9891 bp Feature: domain Description: HNHc Note: nucleases Location: 9891-10056 bp Feature: domain Description: HNHc Note: nucleases Location: 9891 -1 0056 bp Feature: gene Location: 10106-11125 bp Feature: domain Description: KOG1000 Location: 10181-10376 bp Feature: domain Description: KOG1 000 Location: 1 01 81 -1 0376 bp Feature: gene Location: 11196-11495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily ), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: POKP01000053.1 Streptococcus suis strain 1367 SS_1367_Contig53, whole genome shotgun sequence (10989 bp)
Overview 1 RT 1: 3-10497 bp Neighborhood of RT #1 [3, 10988] TraC-F-type Peptidase_M23 Phage_lysozyme2 PRK08581 RVT-GII KOG4768 cas_Csn1 strep_RK_lipo Adhesin_P1_N GbpC GbpC Feature: gene Location: 3-1883 bp Feature: domain Description: TraC-F-type Location: 330-1707 bp Feature: domain Description: TraC-F-type Location: 330-1707 bp Feature: gene Location: 1885-4578 bp Feature: domain Description: Peptidase_M23 Location: 3328-3541 bp Feature: domain Description: Peptidase_M2 3 Location: 332 8-3541 bp Feature: domain Description: Phage_lysozyme2 Location: 3682-4195 bp Feature: domain Description: Phage_lysozyme2 Location: 3682 -4195 bp Feature: domain Description: PRK08581 Location: 4312-4561 bp Feature: domain Description: PRK08581 Location: 4312 -4561 bp Feature: gene Location: 5287-7200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5614-6349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5614-6349 bp Feature: domain Description: KOG4768 Location: 6490-6601 bp Feature: domain Description: KOG4768 Location: 6490-6601 bp Feature: domain Description: cas_Csn1 Location: 6757-7039 bp Feature: domain Description: cas_Csn1 Location: 6757-7039 bp Feature: gene Location: 7812-8447 bp Feature: gene Location: 8607-10988 bp Feature: domain Description: strep_RK_lipo Location: 8664-8769 bp Feature: domain Description: strep_RK_lipo Location: 8664-8769 bp Feature: domain Description: Adhesin_P1_N Location: 8919-9108 bp Feature: domain Description: Adhesin_P1_N Location: 8919-9108 bp Feature: domain Description: GbpC Location: 9717-9909 bp Feature: domain Description: GbpC Location: 9717-9909 bp Feature: domain Description: GbpC Location: 9909-10497 bp Feature: domain Description: GbpC Location: 9909-10497 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase ), cas_Csn1 (TIGR01865), strep_RK_lipo (TIGR03726), Adhesin_P1_N (pfam18652), GbpC (pfam08363)