myRT

myRT report for GCA_002961265.1_ASM296126v1

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Seq: POLI01000042.1 Streptococcus suis strain 1251 SS_1251_Contig42, whole genome shotgun sequence (153856 bp)
Overview 1 RT 1: 52078-62217 bp Neighborhood of RT #1 [52078, 62217] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 52078-52587 bp Feature: gene Location: 52637-58090 bp Feature: domain Description: N6_Mtase Location: 54641-55232 bp Feature: domain Description: N6_Mtase Location: 54641 -55232 bp Feature: domain Description: COG4646 Location: 55826-57947 bp Feature: domain Description: COG4646 Location: 55826-57947 bp Feature: gene Location: 58588-60366 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58849-59641 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58849-59641 bp Feature: domain Description: Intron_maturas2 Location: 59746-59977 bp Feature: domain Description: Intron_maturas2 Location: 59746-59977 bp Feature: domain Description: HNHc Note: nucleases Location: 60142-60328 bp Feature: domain Description: HNHc Note: nucleases Location: 601 42-60328 bp Feature: gene Location: 60504-61847 bp Feature: domain Description: KOG1000 Location: 60783-61098 bp Feature: domain Description: KOG1 000 Location: 60783-61 098 bp Feature: gene Location: 61918-62217 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )