myRT

myRT report for GCA_002961275.1_ASM296127v1

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Seq: POLK01000112.1 Streptococcus suis strain 1247 SS_1247_Contig112, whole genome shotgun sequence (153789 bp)
Overview 1 RT 1: 52011-62150 bp Neighborhood of RT #1 [52011, 62150] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 52011-52520 bp Feature: gene Location: 52570-58023 bp Feature: domain Description: N6_Mtase Location: 54574-55165 bp Feature: domain Description: N6_Mtase Location: 54574-551 65 bp Feature: domain Description: COG4646 Location: 55759-57880 bp Feature: domain Description: COG4646 Location: 55759-57880 bp Feature: gene Location: 58521-60299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58782-59574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58782-59574 bp Feature: domain Description: Intron_maturas2 Location: 59679-59910 bp Feature: domain Description: Intron_maturas2 Location: 59679-5991 0 bp Feature: domain Description: HNHc Note: nucleases Location: 60075-60261 bp Feature: domain Description: HNHc Note: nucleases Location: 60075-60261 bp Feature: gene Location: 60437-61780 bp Feature: domain Description: KOG1000 Location: 60716-61031 bp Feature: domain Description: KOG1 000 Location: 6071 6-61 031 bp Feature: gene Location: 61851-62150 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )