myRT

myRT report for GCA_002962485.1_ASM296248v1

Download annotations/find similar RTs

Seq: POJJ01000022.1 Streptococcus suis strain 2151 SS_2151_Contig22, whole genome shotgun sequence (217760 bp)
Overview 1 RT 1: 194049-203319 bp Neighborhood of RT #1 [194049, 203327] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc SF2_C_SNF TnpV Feature: gene Location: 194049-194600 bp Feature: gene Location: 194650-200091 bp Feature: domain Description: N6_Mtase Location: 196642-197233 bp Feature: domain Description: N6_Mtase Location: 1 96642-1 97233 bp Feature: domain Description: COG4646 Location: 197824-199948 bp Feature: domain Description: COG4646 Location: 1 97824-1 99948 bp Feature: gene Location: 200589-202367 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200850-201642 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 200850-201 642 bp Feature: domain Description: Intron_maturas2 Location: 201747-201978 bp Feature: domain Description: Intron_maturas2 Location: 201 747-201 978 bp Feature: domain Description: HNHc Note: nucleases Location: 202143-202329 bp Feature: domain Description: HNHc Note: nucleases Location: 2021 43-202329 bp Feature: gene Location: 202505-202972 bp Feature: domain Description: SF2_C_SNF Location: 202748-202895 bp Feature: domain Description: SF2_C_SNF Location: 202748-202895 bp Feature: gene Location: 202953-203327 bp Feature: domain Description: TnpV Location: 202989-203319 bp Feature: domain Description: TnpV Location: 202989-20331 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), SF2_C_SNF (cd18793), TnpV (pfam14198)

Seq: POJJ01000035.1 Streptococcus suis strain 2151 SS_2151_Contig35, whole genome shotgun sequence (53251 bp)
Overview 1 RT 1: 15737-22003 bp Neighborhood of RT #1 [15737, 22023] valS RVT-Retrons RAYT Feature: gene Location: 15737-18385 bp Feature: domain Description: valS Location: 15743-18371 bp Feature: domain Description: valS Location: 15743-18371 bp Feature: gene Location: 18473-19798 bp Feature: gene Location: 20004-20960 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 20139-20700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 0139-2 0700 bp Feature: gene Location: 21337-21492 bp Feature: gene Location: 21604-22023 bp Feature: domain Description: RAYT Location: 21625-22003 bp Feature: domain Description: RAYT Location: 2 162 5-2 2 003 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT valS (TIGR00422), RVT-Retrons, RAYT (COG1943)