myRT

myRT report for GCA_002962785.1_ASM296278v1

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Seq: POKW01000054.1 Streptococcus suis strain 1317 SS_1317_Contig54, whole genome shotgun sequence (153911 bp)
Overview 1 RT 1: 52133-62272 bp Neighborhood of RT #1 [52133, 62272] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 52133-52642 bp Feature: gene Location: 52692-58145 bp Feature: domain Description: N6_Mtase Location: 54696-55287 bp Feature: domain Description: N6_Mtase Location: 54696-55287 bp Feature: domain Description: COG4646 Location: 55881-58002 bp Feature: domain Description: COG4646 Location: 55881 -58002 bp Feature: gene Location: 58643-60421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58904-59696 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58904-59696 bp Feature: domain Description: Intron_maturas2 Location: 59801-60032 bp Feature: domain Description: Intron_maturas2 Location: 59801 -60032 bp Feature: domain Description: HNHc Note: nucleases Location: 60197-60383 bp Feature: domain Description: HNHc Note: nucleases Location: 601 97-60383 bp Feature: gene Location: 60559-61902 bp Feature: domain Description: KOG1000 Location: 60838-61153 bp Feature: domain Description: KOG1 000 Location: 60838-61 1 53 bp Feature: gene Location: 61973-62272 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )