myRT

myRT report for GCA_002962805.1_ASM296280v1

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Seq: POLE01000056.1 Streptococcus suis strain 1263 SS_1263_Contig56, whole genome shotgun sequence (153717 bp)
Overview 1 RT 1: 51939-62078 bp Neighborhood of RT #1 [51939, 62078] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc KOG1000 Feature: gene Location: 51939-52448 bp Feature: gene Location: 52498-57951 bp Feature: domain Description: N6_Mtase Location: 54502-55093 bp Feature: domain Description: N6_Mtase Location: 54502-55093 bp Feature: domain Description: COG4646 Location: 55687-57808 bp Feature: domain Description: COG4646 Location: 55687-57808 bp Feature: gene Location: 58449-60227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 58710-59502 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5871 0-59502 bp Feature: domain Description: Intron_maturas2 Location: 59607-59838 bp Feature: domain Description: Intron_maturas2 Location: 59607-59838 bp Feature: domain Description: HNHc Note: nucleases Location: 60003-60189 bp Feature: domain Description: HNHc Note: nucleases Location: 60003-601 89 bp Feature: gene Location: 60365-61708 bp Feature: domain Description: KOG1000 Location: 60644-60959 bp Feature: domain Description: KOG1 000 Location: 60644-60959 bp Feature: gene Location: 61779-62078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )