myRT

myRT report for GCA_002962945.1_ASM296294v1

Download annotations/find similar RTs

Seq: POLS01000032.1 Streptococcus suis strain 1180 SS_1180_Contig32, whole genome shotgun sequence (41599 bp)
Overview 1 RT 1: 19991-25692 bp Neighborhood of RT #1 [19991, 25709] PRK00885 SLATT_5 RVT-AbiA purH purN Feature: gene Location: 19991-21253 bp Feature: domain Description: PRK00885 Location: 19994-21248 bp Feature: domain Description: PRK00885 Location: 1 9994-21 248 bp Feature: gene Location: 21446-22003 bp Feature: domain Description: SLATT_5 Location: 21467-21971 bp Feature: domain Description: SLATT_5 Location: 21 467-21 971 bp Feature: gene Location: 22022-23500 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 22400-22886 bp Feature: RT Description: RVT-AbiA Note: AbiA RT Location: 22400-22886 bp Feature: gene Location: 23601-25148 bp Feature: domain Description: purH Location: 23604-25146 bp Feature: domain Description: purH Location: 23604-251 46 bp Feature: gene Location: 25158-25709 bp Feature: domain Description: purN Location: 25161-25692 bp Feature: domain Description: purN Location: 251 61 -25692 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00885 (phosphoribosylamine--glycine ligase; Provisional), SLATT_5 (pfam18160), RVT-AbiA, purH (TIGR00355), purN (PRK05647)

Seq: POLS01000062.1 Streptococcus suis strain 1180 SS_1180_Contig62, whole genome shotgun sequence (21505 bp)
Overview 1 RT 1: 2963-7092 bp Neighborhood of RT #1 [2963, 7106] HTH_MerR-like RVT-GII GIIM gltX Feature: gene Location: 2963-3208 bp Feature: gene Location: 3229-3591 bp Feature: domain Description: HTH_MerR-like Location: 3232-3586 bp Feature: domain Description: HTH_MerR-like Location: 32 32 -3586 bp Feature: gene Location: 3656-4933 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3860-4475 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3860-4475 bp Feature: domain Description: GIIM Note: maturase Location: 4529-4742 bp Feature: domain Description: GIIM Note: maturase Location: 452 9-4742 bp Feature: gene Location: 4932-5132 bp Feature: gene Location: 5601-7106 bp Feature: domain Description: gltX Location: 5658-7092 bp Feature: domain Description: gltX Location: 5658-7092 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_MerR-like (cd00592), RVT-GII, GIIM (pfam08388), gltX (PRK14895)