myRT

myRT report for GCA_002965325.1_ASM296532v1

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Seq: PTSQ01000027.1 Escherichia albertii strain MOD1-EC5952 MOD1-EC5952_27_length_8894_cov_25.6385, whole genome shotgun sequence (8894 bp)
Overview 1 RT 1: 234-4024 bp Neighborhood of RT #1 [234, 4024] RVT-Retrons ABC_ATPase ABC_ATPase Feature: gene Location: 234-1052 bp Feature: gene Location: 1343-2314 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1469-2045 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 469-2045 bp Feature: gene Location: 2314-3639 bp Feature: domain Description: ABC_ATPase Location: 2362-2536 bp Feature: domain Description: ABC_ATPase Location: 2362-2536 bp Feature: domain Description: ABC_ATPase Location: 2854-3049 bp Feature: domain Description: ABC_ATPase Location: 2854-3049 bp Feature: gene Location: 3749-4024 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ABC_ATPase (pfam09818)

Seq: PTSQ01000002.1 Escherichia albertii strain MOD1-EC5952 MOD1-EC5952_2_length_491134_cov_42.2506, whole genome shotgun sequence (320639 bp)
Overview 1 RT 1: 268271-272257 bp Neighborhood of RT #1 [268271, 272271] Imm57 YhhI RVT-GII GIIM YhhI YhhI RhsA Feature: gene Location: 268271-268750 bp Feature: domain Description: Imm57 Location: 268316-268640 bp Feature: domain Description: Imm57 Location: 2 68316-2 68640 bp Feature: gene Location: 269020-269505 bp Feature: domain Description: YhhI Location: 269023-269386 bp Feature: domain Description: YhhI Location: 2 6902 3-2 69386 bp Feature: gene Location: 269963-271318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 270245-270929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 702 45-2 7092 9 bp Feature: domain Description: GIIM Note: maturase Location: 271010-271232 bp Feature: domain Description: GIIM Note: maturase Location: 2 71010-2 712 32 bp Feature: gene Location: 271329-272078 bp Feature: domain Description: YhhI Location: 271395-271719 bp Feature: domain Description: YhhI Location: 2 71395-2 71719 bp Feature: domain Description: YhhI Location: 271740-271980 bp Feature: domain Description: YhhI Location: 2 71740-2 71980 bp Feature: gene Location: 272089-272271 bp Feature: domain Description: RhsA Location: 272092-272257 bp Feature: domain Description: RhsA Location: 2 72 092 -2 72 2 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Imm57 (pfam15596), YhhI (COG5433), RVT-GII, GIIM (pfam08388), RhsA (COG3209)