myRT

myRT report for GCA_002965465.1_ASM296546v1

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Seq: PTSZ01000015.1 Escherichia sp. MOD1-EC5438 MOD1-EC5438_15_length_113555_cov_29.6337, whole genome shotgun sequence (113555 bp)
Overview 1 RT 1: 11131-17434 bp Neighborhood of RT #1 [11131, 17434] P Q RVT-Retrons Feature: gene Location: 11131-12897 bp Feature: domain Description: P Location: 11158-12892 bp Feature: domain Description: P Location: 1 1 1 58-1 2892 bp Feature: gene Location: 12897-13922 bp Feature: domain Description: Q Location: 12903-13917 bp Feature: domain Description: Q Location: 1 2903-1 391 7 bp Feature: gene Location: 13964-15904 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14288-14912 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4288-1 491 2 bp Feature: gene Location: 15937-16098 bp Feature: gene Location: 16376-17434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons

Seq: PTSZ01000004.1 Escherichia sp. MOD1-EC5438 MOD1-EC5438_4_length_281765_cov_28.3963, whole genome shotgun sequence (281765 bp)
Overview 1 RT 1: 149870-155135 bp Neighborhood of RT #1 [149870, 155143] RVT-GII RVT-GII GIIM aconitase_1 ribA Feature: gene Location: 149870-150064 bp Feature: gene Location: 150172-150393 bp Feature: gene Location: 150483-150689 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150492-150684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150492 -150684 bp Feature: gene Location: 150690-151523 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150693-151110 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 150693-151110 bp Feature: domain Description: GIIM Note: maturase Location: 151158-151377 bp Feature: domain Description: GIIM Note: maturase Location: 151158-151377 bp Feature: gene Location: 151751-154426 bp Feature: domain Description: aconitase_1 Location: 151805-154421 bp Feature: domain Description: aconitase_1 Location: 151805-15442 1 bp Feature: gene Location: 154490-155143 bp Feature: domain Description: ribA Location: 154565-155135 bp Feature: domain Description: ribA Location: 154565-155135 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), aconitase_1 (TIGR01341), ribA (TIGR00505)

Seq: PTSZ01000008.1 Escherichia sp. MOD1-EC5438 MOD1-EC5438_8_length_147493_cov_28.6154, whole genome shotgun sequence (147493 bp)
Overview 1 RT 1: 71574-78357 bp Neighborhood of RT #1 [71574, 78365] PHA00080 Phage_GPA RVT-Retrons ABC_ATPase Q Feature: gene Location: 71574-71798 bp Feature: domain Description: PHA00080 Location: 71580-71790 bp Feature: domain Description: PHA00080 Location: 71580-71790 bp Feature: gene Location: 72060-74330 bp Feature: domain Description: Phage_GPA Location: 72459-73446 bp Feature: domain Description: Phage_GPA Location: 72459-73 446 bp Feature: gene Location: 74657-75646 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74774-75335 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 74774-753 3 5 bp Feature: gene Location: 75648-77000 bp Feature: domain Description: ABC_ATPase Location: 75708-76431 bp Feature: domain Description: ABC_ATPase Location: 75708-7643 1 bp Feature: gene Location: 77331-78365 bp Feature: domain Description: Q Location: 77334-78357 bp Feature: domain Description: Q Location: 773 3 4-783 57 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA00080 (DksA-like zinc finger domain containing protein), Phage_GPA (pfam05840), RVT-Retrons, ABC_ATPase (pfam09818), Q (PHA02536)