myRT

myRT report for GCA_002965625.1_ASM296562v1

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Seq: PTRQ01000013.1 Escherichia sp. MOD1-EC1915 MOD1-EC1915_13_length_136087_cov_28.2174, whole genome shotgun sequence (136087 bp)
Overview 1 RT 1: 66950-70651 bp Neighborhood of RT #1 [66950, 70653] InsQ InsQ RVT-GII GIIM PRK09951 PRK11018 Feature: gene Location: 66950-67768 bp Feature: domain Description: InsQ Location: 66965-67391 bp Feature: domain Description: InsQ Location: 66965-67391 bp Feature: domain Description: InsQ Location: 67391-67682 bp Feature: domain Description: InsQ Location: 67391 -67682 bp Feature: gene Location: 67967-68188 bp Feature: gene Location: 68185-69555 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68521-69133 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 68521 -691 33 bp Feature: domain Description: GIIM Note: maturase Location: 69193-69397 bp Feature: domain Description: GIIM Note: maturase Location: 691 93-69397 bp Feature: gene Location: 69640-70311 bp Feature: domain Description: PRK09951 Location: 69643-70306 bp Feature: domain Description: PRK09951 Location: 69643-70306 bp Feature: gene Location: 70420-70653 bp Feature: domain Description: PRK11018 Location: 70423-70651 bp Feature: domain Description: PRK1 1 01 8 Location: 70423-70651 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT-GII, GIIM (pfam08388), PRK09951 (hypothetical protein; Provisional), PRK11018 (putative sulfurtransferase YedF)

Seq: PTRQ01000027.1 Escherichia sp. MOD1-EC1915 MOD1-EC1915_27_length_74802_cov_32.4796, whole genome shotgun sequence (74802 bp)
Overview 1 RT 1: 59893-62639 bp Neighborhood of RT #1 [59893, 62639] RVT-Retrons Feature: gene Location: 59893-60102 bp Feature: gene Location: 60112-60264 bp Feature: gene Location: 60451-61386 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60562-61147 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 60562 -61147 bp Feature: gene Location: 61386-62348 bp Feature: gene Location: 62388-62639 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PTRQ01000052.1 Escherichia sp. MOD1-EC1915 MOD1-EC1915_52_length_15430_cov_38.1494, whole genome shotgun sequence (15430 bp)
Overview 1 RT 1: 311-3187 bp Neighborhood of RT #1 [311, 3189] RVT-GII GIIM YhhI PRK10167 Feature: gene Location: 311-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1718 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1718 bp Feature: gene Location: 2017-2562 bp Feature: domain Description: YhhI Location: 2020-2224 bp Feature: domain Description: YhhI Location: 2020-2224 bp Feature: gene Location: 2680-3189 bp Feature: domain Description: PRK10167 Location: 2683-3187 bp Feature: domain Description: PRK10167 Location: 2683 -3 187 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), PRK10167 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388)

Seq: PTRQ01000068.1 Escherichia sp. MOD1-EC1915 MOD1-EC1915_68_length_6740_cov_64.9338, whole genome shotgun sequence (6740 bp)
Overview 1 RT 1: 3022-6122 bp Neighborhood of RT #1 [3022, 6124] PinE RVT-GII GIIM HigB-like_toxin Feature: gene Location: 3022-3600 bp Feature: domain Description: PinE Location: 3040-3592 bp Feature: domain Description: PinE Location: 304 0-3592 bp Feature: gene Location: 4055-4438 bp Feature: gene Location: 4435-5346 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4639-5233 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 639-5233 bp Feature: gene Location: 5337-5678 bp Feature: domain Description: GIIM Note: maturase Location: 5382-5592 bp Feature: domain Description: GIIM Note: maturase Location: 5382-5592 bp Feature: gene Location: 5828-6124 bp Feature: domain Description: HigB-like_toxin Location: 5852-6122 bp Feature: domain Description: HigB-like_toxin Location: 5852-6122 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), HigB-like_toxin (pfam05015)

Seq: PTRQ01000092.1 Escherichia sp. MOD1-EC1915 MOD1-EC1915_92_length_2369_cov_89.7426, whole genome shotgun sequence (2369 bp)
Overview 1 RT 1: 311-2293 bp Neighborhood of RT #1 [311, 2367] RVT-GII GIIM DDE_Tnp_1_assoc Feature: gene Location: 311-1810 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1421 bp Feature: domain Description: GIIM Note: maturase Location: 1511-1718 bp Feature: domain Description: GIIM Note: maturase Location: 15 11-1718 bp Feature: gene Location: 2017-2367 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2038-2293 bp Feature: domain Description: DDE_Tnp_1_assoc Location: 2038-2293 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1_assoc (pfam13808), RVT-GII, GIIM (pfam08388)