myRT

myRT report for GCA_002965805.1_ASM296580v1

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Seq: PTSG01000023.1 Escherichia sp. MOD1-EC6150 MOD1-EC6150_23_length_90945_cov_24.6424, whole genome shotgun sequence (90945 bp)
Overview 1 RT 1: 22874-28451 bp Neighborhood of RT #1 [22874, 28459] RVT-GII GIIM aconitase_1 ribA Feature: gene Location: 22874-23020 bp Feature: gene Location: 23185-23379 bp Feature: gene Location: 23487-24839 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23808-24426 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23808-24426 bp Feature: domain Description: GIIM Note: maturase Location: 24474-24693 bp Feature: domain Description: GIIM Note: maturase Location: 24474-24693 bp Feature: gene Location: 25067-27742 bp Feature: domain Description: aconitase_1 Location: 25121-27737 bp Feature: domain Description: aconitase_1 Location: 251 21 -27737 bp Feature: gene Location: 27806-28459 bp Feature: domain Description: ribA Location: 27881-28451 bp Feature: domain Description: ribA Location: 27881 -28451 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), aconitase_1 (TIGR01341), ribA (TIGR00505)

Seq: PTSG01000026.1 Escherichia sp. MOD1-EC6150 MOD1-EC6150_26_length_64390_cov_24.7338, whole genome shotgun sequence (64390 bp)
Overview 1 RT 1: 3-4112 bp Neighborhood of RT #1 [3, 4117] Psu RVT-Retrons PRK09692 Feature: gene Location: 3-395 bp Feature: domain Description: Psu Location: 6-378 bp Feature: domain Description: Psu Location: 6-378 bp Feature: gene Location: 585-2084 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1296-1851 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 96-1851 bp Feature: gene Location: 2086-2763 bp Feature: gene Location: 2951-4117 bp Feature: domain Description: PRK09692 Location: 2960-4112 bp Feature: domain Description: PRK09692 Location: 2 960-4112 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), Psu (pfam07455), RVT-Retrons