myRT

myRT report for GCA_002966065.1_ASM296606v1

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Seq: PTRO01000129.1 Escherichia sp. MOD1-EC4516 EC4516_129, whole genome shotgun sequence (1586 bp)
Overview 1 RT 1: 2-1585 bp Neighborhood of RT #1 [2, 1585] RVT-GII Feature: gene Location: 2-1276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1112 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 455-1 1 1 2 bp Feature: gene Location: 1337-1585 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PTRO01000043.1 Escherichia sp. MOD1-EC4516 EC4516_43, whole genome shotgun sequence (27192 bp)
Overview 1 RT 1: 12150-15193 bp Neighborhood of RT #1 [12150, 15193] RVT-Retrons Feature: gene Location: 12150-12401 bp Feature: gene Location: 12441-12806 bp Feature: gene Location: 13402-14337 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13513-14098 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 13513-14098 bp Feature: gene Location: 14686-14895 bp Feature: gene Location: 14900-15193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: PTRO01000052.1 Escherichia sp. MOD1-EC4516 EC4516_52, whole genome shotgun sequence (97510 bp)
Overview 1 RT 1: 69042-72659 bp Neighborhood of RT #1 [69042, 72745] PRK11018 PRK09951 RVT-GII GIIM InsQ InsQ Feature: gene Location: 69042-69275 bp Feature: domain Description: PRK11018 Location: 69045-69273 bp Feature: domain Description: PRK11018 Location: 69045-69273 bp Feature: gene Location: 69384-70055 bp Feature: domain Description: PRK09951 Location: 69387-70050 bp Feature: domain Description: PRK09951 Location: 693 87-70050 bp Feature: gene Location: 70140-71510 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70476-71088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 70476-71088 bp Feature: domain Description: GIIM Note: maturase Location: 71148-71352 bp Feature: domain Description: GIIM Note: maturase Location: 71148-713 52 bp Feature: gene Location: 71507-71728 bp Feature: gene Location: 71927-72745 bp Feature: domain Description: InsQ Location: 71942-72368 bp Feature: domain Description: InsQ Location: 71942-723 68 bp Feature: domain Description: InsQ Location: 72368-72659 bp Feature: domain Description: InsQ Location: 723 68-72659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK11018 (putative sulfurtransferase YedF), PRK09951 (hypothetical protein; Provisional), RVT-GII, GIIM (pfam08388), InsQ (COG0675)

Seq: PTRO01000081.1 Escherichia sp. MOD1-EC4516 EC4516_81, whole genome shotgun sequence (37747 bp)
Overview 1 RT 1: 8306-11406 bp Neighborhood of RT #1 [8306, 11408] PinE RVT-GII GIIM HigB-like_toxin Feature: gene Location: 8306-8884 bp Feature: domain Description: PinE Location: 8324-8876 bp Feature: domain Description: PinE Location: 8324 -8876 bp Feature: gene Location: 9339-9722 bp Feature: gene Location: 9719-10630 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9923-10517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9923-10517 bp Feature: gene Location: 10621-10962 bp Feature: domain Description: GIIM Note: maturase Location: 10666-10876 bp Feature: domain Description: GIIM Note: maturase Location: 10666-10876 bp Feature: gene Location: 11112-11408 bp Feature: domain Description: HigB-like_toxin Location: 11136-11406 bp Feature: domain Description: HigB-like_toxin Location: 11136-114 06 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HigB-like_toxin (pfam05015), PinE (COG1961), RVT-GII