myRT

myRT report for GCA_002967095.1_BS989

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Seq: PUGK01000024.1 Shigella flexneri strain BS989 CFSAN004201_41, whole genome shotgun sequence (4627 bp)
Overview 1 RT 1: 2592-4151 bp Neighborhood of RT #1 [2592, 4168] GIIM RVT-GII Tra5 Feature: gene Location: 2592-2747 bp Feature: gene Location: 2773-3144 bp Feature: domain Description: GIIM Note: maturase Location: 2851-3070 bp Feature: domain Description: GIIM Note: maturase Location: 2851 -3070 bp Feature: gene Location: 3152-3955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3452-3947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3452-3947 bp Feature: gene Location: 3968-4168 bp Feature: domain Description: Tra5 Location: 3977-4151 bp Feature: domain Description: Tra5 Location: 3977-41 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801)

Seq: PUGK01000042.1 Shigella flexneri strain BS989 CFSAN004201_82, whole genome shotgun sequence (3021 bp)
Overview 1 RT 1: 50-2674 bp Neighborhood of RT #1 [50, 2919] InsE PHA02517 RVT-GII GIIM Feature: gene Location: 50-352 bp Feature: domain Description: InsE Location: 59-341 bp Feature: domain Description: InsE Location: 59-341 bp Feature: gene Location: 379-804 bp Feature: domain Description: PHA02517 Location: 403-739 bp Feature: domain Description: PHA02 517 Location: 403-739 bp Feature: gene Location: 1396-2919 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1669-2401 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1669-2 401 bp Feature: domain Description: GIIM Note: maturase Location: 2476-2674 bp Feature: domain Description: GIIM Note: maturase Location: 2 476-2 674 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963)