myRT

myRT report for GCA_002967135.1_BS986

Download annotations/find similar RTs

Seq: PUGN01001039.1 Shigella boydii strain BS986 CFSAN003845_2805, whole genome shotgun sequence (1027 bp)
Overview 1 RT 1: 367-1027 bp Neighborhood of RT #1 [367, 1026] Tra5 RVT-GII Feature: gene Location: 367-588 bp Feature: domain Description: Tra5 Location: 379-571 bp Feature: domain Description: Tra5 Location: 379-571 bp Feature: gene Location: 601-1026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 901 -1 027 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII

Seq: PUGN01001402.1 Shigella boydii strain BS986 CFSAN003845_3373, whole genome shotgun sequence (3989 bp)
Overview 1 RT 1: 2-2769 bp Neighborhood of RT #1 [2, 2769] COG3547 RVT-GII GIIM Feature: gene Location: 2-442 bp Feature: domain Description: COG3547 Location: 68-428 bp Feature: domain Description: COG3547 Location: 68-42 8 bp Feature: gene Location: 538-705 bp Feature: gene Location: 731-1948 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 917-1571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 917-1571 bp Feature: domain Description: GIIM Note: maturase Location: 1649-1871 bp Feature: domain Description: GIIM Note: maturase Location: 1649-1871 bp Feature: gene Location: 1959-2378 bp Feature: gene Location: 2428-2769 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PUGN01001780.1 Shigella boydii strain BS986 CFSAN003845_4031, whole genome shotgun sequence (591 bp)
Overview 1 RT 1: 174-588 bp Neighborhood of RT #1 [174, 590] RVT-GII Feature: gene Location: 174-590 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195-588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195-588 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII