myRT

myRT report for GCA_002967145.1_BS988

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Seq: PUGL01000268.1 Shigella flexneri strain BS988 CFSAN004215_268, whole genome shotgun sequence (2291 bp)
Overview 1 RT 1: 93-2290 bp Neighborhood of RT #1 [93, 2290] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1 098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 73-1 371 bp Feature: gene Location: 1910-2290 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PUGL01000338.1 Shigella flexneri strain BS988 CFSAN004215_339, whole genome shotgun sequence (5784 bp)
Overview 1 RT 1: 3117-5756 bp Neighborhood of RT #1 [3117, 5782] COG3547 RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 3117-3602 bp Feature: domain Description: COG3547 Location: 3135-3588 bp Feature: domain Description: COG3547 Location: 3135-3588 bp Feature: gene Location: 3698-3865 bp Feature: gene Location: 3891-5108 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077-4731 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4077-4731 bp Feature: domain Description: GIIM Note: maturase Location: 4809-5031 bp Feature: domain Description: GIIM Note: maturase Location: 4809-5031 bp Feature: gene Location: 5119-5502 bp Feature: gene Location: 5585-5782 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5600-5756 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5600-5756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: PUGL01000055.1 Shigella flexneri strain BS988 CFSAN004215_55, whole genome shotgun sequence (553 bp)
Overview 1 RT 1: 51-552 bp Neighborhood of RT #1 [51, 551] RVT-GII Feature: gene Location: 51-551 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 351-552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 51-552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUGL01000056.1 Shigella flexneri strain BS988 CFSAN004215_56, whole genome shotgun sequence (3300 bp)
Overview 1 RT 1: 2420-3289 bp Neighborhood of RT #1 [2420, 3297] GIIM RVT-GII Feature: gene Location: 2420-2575 bp Feature: gene Location: 2601-2927 bp Feature: domain Description: GIIM Note: maturase Location: 2634-2853 bp Feature: domain Description: GIIM Note: maturase Location: 2634 -2853 bp Feature: gene Location: 2980-3297 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2986-3289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2986-3289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII