myRT

myRT report for GCA_002967355.1_BS967

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Seq: PUHA01000154.1 Shigella flexneri strain BS967 CFSAN004209_357, whole genome shotgun sequence (13469 bp)
Overview 1 RT 1: 8157-11292 bp Neighborhood of RT #1 [8157, 11292] PAP2_acid_phosphatase Tra5 RVT-GII GIIM Feature: gene Location: 8157-8906 bp Feature: domain Description: PAP2_acid_phosphatase Location: 8232-8886 bp Feature: domain Description: PAP2_acid_phosphatase Location: 8232-8886 bp Feature: gene Location: 9302-9502 bp Feature: domain Description: Tra5 Location: 9311-9485 bp Feature: domain Description: Tra5 Location: 931 1 -9485 bp Feature: gene Location: 9515-10318 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9815-10310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 981 5-1 031 0 bp Feature: gene Location: 10371-10697 bp Feature: domain Description: GIIM Note: maturase Location: 10404-10623 bp Feature: domain Description: GIIM Note: maturase Location: 1 0404-1 0623 bp Feature: gene Location: 11050-11292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), PAP2_acid_phosphatase (cd03397), Tra5 (COG2801), RVT-GII

Seq: PUHA01000275.1 Shigella flexneri strain BS967 CFSAN004209_613, whole genome shotgun sequence (18120 bp)
Overview 1 RT 1: 14377-17030 bp Neighborhood of RT #1 [14377, 17030] COG3547 RVT-GII GIIM Feature: gene Location: 14377-14862 bp Feature: domain Description: COG3547 Location: 14395-14848 bp Feature: domain Description: COG3547 Location: 14395-14848 bp Feature: gene Location: 14958-15125 bp Feature: gene Location: 15151-16368 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15337-15991 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 15337-15991 bp Feature: domain Description: GIIM Note: maturase Location: 16069-16291 bp Feature: domain Description: GIIM Note: maturase Location: 16069-162 91 bp Feature: gene Location: 16379-16762 bp Feature: gene Location: 16836-17030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PUHA01000040.1 Shigella flexneri strain BS967 CFSAN004209_98, whole genome shotgun sequence (1868 bp)
Overview 1 RT 1: 1-1662 bp Neighborhood of RT #1 [1, 1865] RVT-GII Feature: gene Location: 1-363 bp Feature: gene Location: 657-1865 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 930-1662 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 93 0-1662 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII