myRT

myRT report for GCA_002967395.1_BS962

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Seq: PUHC01000085.1 Shigella flexneri strain BS962 CFSAN004207_146, whole genome shotgun sequence (4160 bp)
Overview 1 RT 1: 2592-4142 bp Neighborhood of RT #1 [2592, 4159] GIIM RVT-GII Tra5 Feature: gene Location: 2592-2747 bp Feature: gene Location: 2773-3144 bp Feature: domain Description: GIIM Note: maturase Location: 2851-3070 bp Feature: domain Description: GIIM Note: maturase Location: 2851 -3070 bp Feature: gene Location: 3152-3955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3452-3947 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3452-3947 bp Feature: gene Location: 3968-4159 bp Feature: domain Description: Tra5 Location: 3977-4142 bp Feature: domain Description: Tra5 Location: 3977-41 42 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801)

Seq: PUHC01000156.1 Shigella flexneri strain BS962 CFSAN004207_284, whole genome shotgun sequence (6098 bp)
Overview 1 RT 1: 3272-5925 bp Neighborhood of RT #1 [3272, 5925] COG3547 RVT-GII GIIM Feature: gene Location: 3272-3757 bp Feature: domain Description: COG3547 Location: 3290-3743 bp Feature: domain Description: COG3547 Location: 32 90-3743 bp Feature: gene Location: 3853-4020 bp Feature: gene Location: 4046-5263 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4232-4886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 42 32 -4886 bp Feature: domain Description: GIIM Note: maturase Location: 4964-5186 bp Feature: domain Description: GIIM Note: maturase Location: 4964-5186 bp Feature: gene Location: 5274-5657 bp Feature: gene Location: 5731-5925 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PUHC01000015.1 Shigella flexneri strain BS962 CFSAN004207_36, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)