myRT

myRT report for GCA_002967445.1_BS938

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Seq: PUHH01000468.1 Shigella flexneri strain BS938 CFSAN002077_1216, whole genome shotgun sequence (2172 bp)
Overview 1 RT 1: 3-2107 bp Neighborhood of RT #1 [3, 2107] RVT-GII GIIM Feature: gene Location: 3-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-1008 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 276-1 008 bp Feature: domain Description: GIIM Note: maturase Location: 1083-1281 bp Feature: domain Description: GIIM Note: maturase Location: 1 083-1 281 bp Feature: gene Location: 1736-2107 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PUHH01000065.1 Shigella flexneri strain BS938 CFSAN002077_123, whole genome shotgun sequence (4028 bp)
Overview 1 RT 1: 2-1917 bp Neighborhood of RT #1 [2, 1917] Tra5 RVT-GII GIIM Feature: gene Location: 2-127 bp Feature: domain Description: Tra5 Location: 5-110 bp Feature: domain Description: Tra5 Location: 5-110 bp Feature: gene Location: 140-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-935 bp Feature: gene Location: 996-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1029-1248 bp Feature: domain Description: GIIM Note: maturase Location: 102 9-12 48 bp Feature: gene Location: 1675-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra5 (COG2801), GIIM (pfam08388)

Seq: PUHH01000238.1 Shigella flexneri strain BS938 CFSAN002077_489, whole genome shotgun sequence (5332 bp)
Overview 1 RT 1: 2745-5130 bp Neighborhood of RT #1 [2745, 5130] COG3547 RVT-GII GIIM Feature: gene Location: 2745-3230 bp Feature: domain Description: COG3547 Location: 2763-3216 bp Feature: domain Description: COG3 547 Location: 2763 -3 216 bp Feature: gene Location: 3326-3493 bp Feature: gene Location: 3519-4736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3705-4359 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 705-43 59 bp Feature: domain Description: GIIM Note: maturase Location: 4437-4659 bp Feature: domain Description: GIIM Note: maturase Location: 443 7-4659 bp Feature: gene Location: 4747-5130 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)