myRT

myRT report for GCA_002967625.1_BS942

Download annotations/find similar RTs

Seq: PUHG01000498.1 Shigella flexneri strain BS942 CFSAN002078_1244, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 2-221 bp Neighborhood of RT #1 [2, 220] RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 9-221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUHG01000509.1 Shigella flexneri strain BS942 CFSAN002078_1288, whole genome shotgun sequence (4028 bp)
Overview 1 RT 1: 2-1917 bp Neighborhood of RT #1 [2, 1917] Tra5 RVT-GII GIIM Feature: gene Location: 2-127 bp Feature: domain Description: Tra5 Location: 5-110 bp Feature: domain Description: Tra5 Location: 5-110 bp Feature: gene Location: 140-943 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 440-935 bp Feature: gene Location: 996-1322 bp Feature: domain Description: GIIM Note: maturase Location: 1029-1248 bp Feature: domain Description: GIIM Note: maturase Location: 102 9-12 48 bp Feature: gene Location: 1675-1917 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Tra5 (COG2801), GIIM (pfam08388)

Seq: PUHG01000563.1 Shigella flexneri strain BS942 CFSAN002078_1439, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 2-218 bp Neighborhood of RT #1 [2, 220] RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUHG01000876.1 Shigella flexneri strain BS942 CFSAN002078_2281, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 2-221 bp Neighborhood of RT #1 [2, 220] RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-221 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 119-221 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUHG01001033.1 Shigella flexneri strain BS942 CFSAN002078_2740, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 2-218 bp Neighborhood of RT #1 [2, 220] RVT-GII Feature: gene Location: 2-220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5-218 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5 -218 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUHG01001041.1 Shigella flexneri strain BS942 CFSAN002078_2755, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 1-181 bp Neighborhood of RT #1 [1, 219] RVT-GII Feature: gene Location: 1-219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUHG01000321.1 Shigella flexneri strain BS942 CFSAN002078_623, whole genome shotgun sequence (221 bp)
Overview 1 RT 1: 1-181 bp Neighborhood of RT #1 [1, 219] RVT-GII Feature: gene Location: 1-219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-181 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4-181 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUHG01000333.1 Shigella flexneri strain BS942 CFSAN002078_656, whole genome shotgun sequence (5793 bp)
Overview 1 RT 1: 597-2574 bp Neighborhood of RT #1 [597, 2588] RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 597-1814 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 783-1437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 78 3-1437 bp Feature: domain Description: GIIM Note: maturase Location: 1515-1737 bp Feature: domain Description: GIIM Note: maturase Location: 1515-1737 bp Feature: gene Location: 1930-2076 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1942-2053 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1942-2053 bp Feature: gene Location: 2103-2588 bp Feature: domain Description: COG3547 Location: 2121-2574 bp Feature: domain Description: COG3547 Location: 2121-2574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase ), RVT-GII, GIIM (pfam08388)

Seq: PUHG01000397.1 Shigella flexneri strain BS942 CFSAN002078_905, whole genome shotgun sequence (953 bp)
Overview 1 RT 1: 93-726 bp Neighborhood of RT #1 [93, 950] RVT-GII GIIM Feature: gene Location: 93-950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96-432 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9 6-432 bp Feature: domain Description: GIIM Note: maturase Location: 507-726 bp Feature: domain Description: GIIM Note: maturase Location: 507-726 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)