myRT

myRT report for GCA_002967635.1_SH200

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Seq: PUHJ01000196.1 Shigella flexneri strain SH200 SH200_196_length_4365_cov_208.225_ID_53287, whole genome shotgun sequence (4365 bp)
Overview 1 RT 1: 82-2072 bp Neighborhood of RT #1 [82, 2072] Tra5 RVT-GII GIIM Feature: gene Location: 82-282 bp Feature: domain Description: Tra5 Location: 91-265 bp Feature: domain Description: Tra5 Location: 91 -265 bp Feature: gene Location: 295-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 595-1090 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 595-1 090 bp Feature: gene Location: 1151-1477 bp Feature: domain Description: GIIM Note: maturase Location: 1184-1403 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 84-1 403 bp Feature: gene Location: 1830-2072 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), RVT-GII, Tra5 (COG2801)

Seq: PUHJ01000243.1 Shigella flexneri strain SH200 SH200_243_length_2354_cov_239.689_ID_53381, whole genome shotgun sequence (2354 bp)
Overview 1 RT 1: 47-1926 bp Neighborhood of RT #1 [47, 1926] RVT-GII GIIM Feature: gene Location: 47-1180 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149-803 bp Feature: domain Description: GIIM Note: maturase Location: 881-1103 bp Feature: domain Description: GIIM Note: maturase Location: 881-1103 bp Feature: gene Location: 1275-1658 bp Feature: gene Location: 1732-1926 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PUHJ01000249.1 Shigella flexneri strain SH200 SH200_249_length_2272_cov_221.612_ID_53393, whole genome shotgun sequence (2272 bp)
Overview 1 RT 1: 93-2269 bp Neighborhood of RT #1 [93, 2269] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Feature: gene Location: 1910-2269 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)