myRT

myRT report for GCA_002968055.1_ASM296805v1

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Seq: PUIQ01000116.1 Burkholderia cepacia strain Y14-15 Scaffold113_1, whole genome shotgun sequence (8096 bp)
Overview 1 RT 1: 1-1413 bp Neighborhood of RT #1 [1, 1413] DDE_Tnp_IS66_C RVT-GII Feature: gene Location: 1-222 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 58-169 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 58-1 69 bp Feature: gene Location: 289-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493-748 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493-748 bp Feature: gene Location: 797-1111 bp Feature: gene Location: 1237-1413 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), RVT-GII

Seq: PUIQ01000196.1 Burkholderia cepacia strain Y14-15 Scaffold192_1, whole genome shotgun sequence (1015 bp)
Overview 1 RT 1: 3-855 bp Neighborhood of RT #1 [3, 1013] RVT-GII Feature: gene Location: 3-1013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198-855 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 198-855 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUIQ01000029.1 Burkholderia cepacia strain Y14-15 Scaffold29_1, whole genome shotgun sequence (102146 bp)
Overview 1 RT 1: 35916-41548 bp Neighborhood of RT #1 [35916, 41571] DoxX dTDP_HR_like_SDR_e RVT-Retrons Histone_HNS MFS_MucK Feature: gene Location: 35916-36329 bp Feature: domain Description: DoxX Location: 35949-36327 bp Feature: domain Description: DoxX Location: 3 5949-3 63 27 bp Feature: gene Location: 36581-37546 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 36620-37505 bp Feature: domain Description: dTDP_HR_like_SDR_e Location: 3 6620-3 7505 bp Feature: gene Location: 37834-39294 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38407-39046 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 8407-3 9046 bp Feature: gene Location: 39370-39987 bp Feature: domain Description: Histone_HNS Location: 39679-39916 bp Feature: domain Description: Histone_HNS Location: 3 9679-3 9916 bp Feature: gene Location: 40324-41571 bp Feature: domain Description: MFS_MucK Location: 40414-41548 bp Feature: domain Description: MFS_MucK Location: 40414-41548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DoxX (pfam07681), dTDP_HR_like_SDR_e (cd05254), RVT-Retrons, Histone_HNS (pfam00816), MFS_MucK (cd17371)