myRT

myRT report for GCA_002968185.1_ASM296818v1

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Seq: PTES01000003.1 Shigella boydii strain 65-6310 plasmid unnamed1 contig3_65-6310, whole genome shotgun sequence (164492 bp)
Overview 1 RT 1: 22335-25632 bp 2 RT 2: 97774-100356 bp Neighborhood of RT #1 [22335, 25652] PHA02517 InsE RVT-GII Tra5 PAP2_acid_phosphatase Neighborhood of RT #2 [97774, 100370] DDE_Tnp_IS66 group_II_RT_mat RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C COG3547 Feature: gene Location: 22335-23222 bp Feature: domain Description: PHA02517 Location: 22395-23220 bp Feature: domain Description: PHA0251 7 Location: 22395-23220 bp Feature: gene Location: 23222-23548 bp Feature: domain Description: InsE Location: 23225-23546 bp Feature: domain Description: InsE Location: 23225-23546 bp Feature: gene Location: 23554-24294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23854-24244 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23854-24244 bp Feature: gene Location: 24307-24528 bp Feature: domain Description: Tra5 Location: 24319-24511 bp Feature: domain Description: Tra5 Location: 2431 9-2451 1 bp Feature: gene Location: 24903-25652 bp Feature: domain Description: PAP2_acid_phosphatase Location: 24978-25632 bp Feature: domain Description: PAP2_acid_phosphatase Location: 24978-25632 bp Feature: gene Location: 97774-97905 bp Feature: domain Description: DDE_Tnp_IS66 Location: 97786-97879 bp Feature: domain Description: DDE_Tnp_IS66 Location: 97786-97879 bp Feature: gene Location: 98366-98638 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 98399-98600 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 98399-98600 bp Feature: gene Location: 98647-99054 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98653-99028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 98653-99028 bp Feature: gene Location: 99069-99596 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99075-99219 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99075-9921 9 bp Feature: domain Description: GIIM Note: maturase Location: 99297-99519 bp Feature: domain Description: GIIM Note: maturase Location: 99297-9951 9 bp Feature: gene Location: 99712-99858 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 99724-99835 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 99724-99835 bp Feature: gene Location: 99885-100370 bp Feature: domain Description: COG3547 Location: 99903-100356 bp Feature: domain Description: COG3547 Location: 99903-1 00356 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), InsE (COG2963), RVT-GII, Tra5 (COG2801), PAP2_acid_phosphatase (cd03397), DDE_Tnp_IS66 (pfam03050), group_II_RT_mat (TIGR04416), GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817), COG3547 (Transposase )