myRT

myRT report for GCA_002969005.1_ASM296900v1

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Seq: PUWV01000140.1 Photorhabdus luminescens strain H4 NODE_140_LENGTH_1636_COV_96.9887, whole genome shotgun sequence (1636 bp)
Overview 1 RT 1: 152-1379 bp Neighborhood of RT #1 [152, 1471] RVT-GII GIIM Feature: gene Location: 152-1471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1082 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 428-1 082 bp Feature: domain Description: GIIM Note: maturase Location: 1166-1379 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 66-1 379 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: PUWV01000001.1 Photorhabdus luminescens strain H4 NODE_1_LENGTH_212155_COV_15.8103, whole genome shotgun sequence (212155 bp)
Overview 1 RT 1: 91114-97321 bp Neighborhood of RT #1 [91114, 97341] PRK05567 guaA RVT-UG17 SLATT_5 upstrm_HI1419 Feature: gene Location: 91114-92667 bp Feature: domain Description: PRK05567 Location: 91207-92659 bp Feature: domain Description: PRK05567 Location: 912 07-92 659 bp Feature: gene Location: 92741-94318 bp Feature: domain Description: guaA Location: 92759-94316 bp Feature: domain Description: guaA Location: 92 759-94316 bp Feature: gene Location: 94596-95933 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 94824-95427 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 9482 4-9542 7 bp Feature: gene Location: 95930-96517 bp Feature: domain Description: SLATT_5 Location: 95942-96497 bp Feature: domain Description: SLATT_5 Location: 95942 -96497 bp Feature: gene Location: 97033-97341 bp Feature: domain Description: upstrm_HI1419 Location: 97045-97321 bp Feature: domain Description: upstrm_HI1419 Location: 97045-9732 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05567 (inosine 5'-monophosphate dehydrogenase; Reviewed), guaA (PRK00074), RVT-UG17, SLATT_5 (pfam18160), upstrm_HI1419 (TIGR02683)

Seq: PUWV01000031.1 Photorhabdus luminescens strain H4 NODE_31_LENGTH_65437_COV_22.6631, whole genome shotgun sequence (65437 bp)
Overview 1 RT 1: 20836-25604 bp Neighborhood of RT #1 [20836, 25604] RVT-Retrons ABC_ATPase ABC_ATPase Feature: gene Location: 20836-20967 bp Feature: gene Location: 21440-21568 bp Feature: gene Location: 21844-22830 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21991-22561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21991-22561 bp Feature: gene Location: 22834-24174 bp Feature: domain Description: ABC_ATPase Location: 22888-22984 bp Feature: domain Description: ABC_ATPase Location: 22888-22984 bp Feature: domain Description: ABC_ATPase Location: 23443-23617 bp Feature: domain Description: ABC_ATPase Location: 23 443 -23 617 bp Feature: gene Location: 24573-25604 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, ABC_ATPase (pfam09818)

Seq: PUWV01000004.1 Photorhabdus luminescens strain H4 NODE_4_LENGTH_175725_COV_33.5863, whole genome shotgun sequence (175725 bp)
Overview 1 RT 1: 94627-98434 bp Neighborhood of RT #1 [94627, 98434] COG3177 RVT-Retrons Feature: gene Location: 94627-95736 bp Feature: domain Description: COG3177 Location: 94696-95662 bp Feature: domain Description: COG3177 Location: 94 696-95662 bp Feature: gene Location: 96171-96833 bp Feature: gene Location: 96823-98004 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96973-97549 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 96973-9754 9 bp Feature: gene Location: 98035-98238 bp Feature: gene Location: 98303-98434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3177 (Fic family protein ), RVT-Retrons