myRT

myRT report for GCA_002969015.1_ASM296901v1

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Seq: PUXA01000046.1 Klebsiella pneumoniae strain B32205 plasmid pIncFIBK NODE_46_length_34095_cov_42.9545_ID_91, whole genome shotgun sequence (34095 bp)
Overview 1 RT 1: 25790-28974 bp Neighborhood of RT #1 [25790, 28974] PRK10276 RVT-GII Feature: gene Location: 25790-26215 bp Feature: domain Description: PRK10276 Location: 25793-26201 bp Feature: domain Description: PRK1 0276 Location: 25793-26201 bp Feature: gene Location: 26333-26566 bp Feature: gene Location: 26617-28128 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27022-27736 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27022-27736 bp Feature: gene Location: 28362-28592 bp Feature: gene Location: 28651-28974 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: PUXA01000011.1 Klebsiella pneumoniae strain B32205 NODE_11_length_174042_cov_26.9719_ID_21, whole genome shotgun sequence (174042 bp)
Overview 1 RT 1: 4041-11142 bp Neighborhood of RT #1 [4041, 11142] HTH_23 Nuc_deoxyrib_tr RVT-Retrons AAA_15 Feature: gene Location: 4041-4517 bp Feature: domain Description: HTH_23 Location: 4119-4260 bp Feature: domain Description: HTH_2 3 Location: 4119-42 60 bp Feature: gene Location: 4938-5807 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5460-5631 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 5460-5631 bp Feature: gene Location: 6463-7563 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6643-7177 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6643-7177 bp Feature: gene Location: 7678-9954 bp Feature: domain Description: AAA_15 Location: 7711-8719 bp Feature: domain Description: AAA_15 Location: 7711-8719 bp Feature: gene Location: 10837-11142 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_23 (pfam13384), Nuc_deoxyrib_tr (pfam05014), RVT-Retrons, AAA_15 (pfam13175)

Seq: PUXA01000023.1 Klebsiella pneumoniae strain B32205 NODE_23_length_91561_cov_33.3839_ID_45, whole genome shotgun sequence (91561 bp)
Overview 1 RT 1: 83965-90833 bp Neighborhood of RT #1 [83965, 90835] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 83965-84693 bp Feature: domain Description: FimC Location: 84013-84676 bp Feature: domain Description: FimC Location: 84013 -84676 bp Feature: gene Location: 84725-87334 bp Feature: domain Description: FimD Location: 84782-87323 bp Feature: domain Description: FimD Location: 84782-873 23 bp Feature: gene Location: 87334-89412 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 87742-88186 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 87742-88186 bp Feature: gene Location: 89469-89909 bp Feature: domain Description: Integrase_1 Location: 89475-89691 bp Feature: domain Description: Integrase_1 Location: 89475-89691 bp Feature: gene Location: 90170-90835 bp Feature: domain Description: INT_P4_C Location: 90275-90833 bp Feature: domain Description: INT_P4_C Location: 90275-9083 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: PUXA01000243.1 Klebsiella pneumoniae strain B32205 NODE_243_length_295_cov_2.80102_ID_485, whole genome shotgun sequence (295 bp)
Overview 1 RT 1: 3-192 bp Neighborhood of RT #1 [3, 227] RVT-GII Feature: gene Location: 3-227 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6-192 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII