myRT

myRT report for GCA_002969085.1_ASM296908v1

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Seq: PUWX01000123.1 Photorhabdus luminescens strain H7 H7_C124, whole genome shotgun sequence (944 bp)
Overview 1 RT 1: 216-940 bp Neighborhood of RT #1 [216, 942] RVT-GII Feature: gene Location: 216-353 bp Feature: gene Location: 418-687 bp Feature: gene Location: 772-942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778-940 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 778-940 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUWX01000133.1 Photorhabdus luminescens strain H7 H7_C138, whole genome shotgun sequence (651 bp)
Overview 1 RT 1: 107-647 bp Neighborhood of RT #1 [107, 649] RVT-GII Feature: gene Location: 107-649 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 113-647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUWX01000059.1 Photorhabdus luminescens strain H7 H7_C59, whole genome shotgun sequence (19529 bp)
Overview 1 RT 1: 9491-14014 bp Neighborhood of RT #1 [9491, 14031] Tra8 DDE_Tnp_1_3 RVT-GII GIIM conj_PilL Feature: gene Location: 9491-9865 bp Feature: domain Description: Tra8 Location: 9506-9851 bp Feature: domain Description: Tra8 Location: 9506-9851 bp Feature: gene Location: 10323-11243 bp Feature: domain Description: DDE_Tnp_1_3 Location: 10671-11133 bp Feature: domain Description: DDE_Tnp_1_3 Location: 10671-1113 3 bp Feature: gene Location: 11804-13480 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12428-13103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12428-13 103 bp Feature: domain Description: GIIM Note: maturase Location: 13172-13400 bp Feature: domain Description: GIIM Note: maturase Location: 13 172-13 400 bp Feature: gene Location: 13486-13668 bp Feature: gene Location: 13681-14031 bp Feature: domain Description: conj_PilL Location: 13846-14014 bp Feature: domain Description: conj_PilL Location: 13 846-14014 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra8 (COG2826), DDE_Tnp_1_3 (pfam13612), RVT-GII, GIIM (pfam08388), conj_PilL (TIGR03748)

Seq: PUWX01000060.1 Photorhabdus luminescens strain H7 H7_C60, whole genome shotgun sequence (40640 bp)
Overview 1 RT 1: 39495-40607 bp Neighborhood of RT #1 [39495, 40639] Resolvase RVT-GII Feature: gene Location: 39495-39677 bp Feature: domain Description: Resolvase Location: 39504-39582 bp Feature: domain Description: Resolvase Location: 39504 -39582 bp Feature: gene Location: 39777-40193 bp Feature: gene Location: 40205-40639 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 40211-40607 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 0211-4 0607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Resolvase (smart00857), RVT-GII

Seq: PUWX01000095.1 Photorhabdus luminescens strain H7 H7_C95, whole genome shotgun sequence (4471 bp)
Overview 1 RT 1: 3261-4044 bp Neighborhood of RT #1 [3261, 4469] RVT-GII Feature: gene Location: 3261-3416 bp Feature: gene Location: 3489-3701 bp Feature: gene Location: 3882-4469 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3897-4044 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3897-4044 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: PUWX01000155.1 Photorhabdus luminescens strain H7 H7_REP_C371, whole genome shotgun sequence (2417 bp)
Overview 1 RT 1: 449-2294 bp Neighborhood of RT #1 [449, 2353] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 449-2353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737-1574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 737-1574 bp Feature: domain Description: Intron_maturas2 Location: 1709-1964 bp Feature: domain Description: Intron_maturas2 Location: 1709-196 4 bp Feature: domain Description: HNHc Note: nucleases Location: 2135-2294 bp Feature: domain Description: HNHc Note: nucleases Location: 2135-2294 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)

Seq: PUWX01000165.1 Photorhabdus luminescens strain H7 H7_REP_C381, whole genome shotgun sequence (1643 bp)
Overview 1 RT 1: 83-1615 bp Neighborhood of RT #1 [83, 1615] DDE_Tnp_IS1595 RVT-GII Feature: gene Location: 83-241 bp Feature: gene Location: 259-672 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 268-568 bp Feature: domain Description: DDE_Tnp_IS1595 Location: 268-568 bp Feature: gene Location: 851-1444 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854-1067 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 854-1067 bp Feature: gene Location: 1400-1615 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS1595 (pfam12762), RVT-GII

Seq: PUWX01000177.1 Photorhabdus luminescens strain H7 H7_REP_C418, whole genome shotgun sequence (1895 bp)
Overview 1 RT 1: 1-1847 bp Neighborhood of RT #1 [1, 1894] RVT-GII KOG4768 Feature: gene Location: 1-519 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 289-520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 28 9-520 bp Feature: gene Location: 1205-1894 bp Feature: domain Description: KOG4768 Location: 1238-1847 bp Feature: domain Description: KOG4768 Location: 1238 -18 47 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, KOG4768 (KOG4768, Mitochondrial mRNA maturase )

Seq: PUWX01000185.1 Photorhabdus luminescens strain H7 H7_REP_C438, whole genome shotgun sequence (1062 bp)
Overview 1 RT 1: 2-966 bp Neighborhood of RT #1 [2, 968] RVT-GII RVT-GII RVT-GII Feature: gene Location: 2-136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-107 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8-107 bp Feature: gene Location: 288-614 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 294-486 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 29 4-486 bp Feature: gene Location: 708-968 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-966 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 810-9 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII