myRT

myRT report for GCA_002970395.2_ASM297039v2

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Seq: PVBC02000022.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0299 CRK0299_NODE_27.ctg_1, whole genome shotgun sequence (67920 bp)
Overview 1 RT 1: 39312-42387 bp Neighborhood of RT #1 [39312, 42392] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 39312-39530 bp Feature: domain Description: PRK09678 Location: 39315-39513 bp Feature: domain Description: PRK09678 Location: 3931 5-3951 3 bp Feature: gene Location: 39777-39965 bp Feature: gene Location: 39934-40707 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 40069-40522 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 40069-40522 bp Feature: gene Location: 41323-41805 bp Feature: domain Description: SmpB Location: 41353-41797 bp Feature: domain Description: SmpB Location: 41 353-41 797 bp Feature: gene Location: 41916-42392 bp Feature: domain Description: PRK10724 Location: 41922-42387 bp Feature: domain Description: PRK1 0724 Location: 41 922-42387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: PVBC02000071.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0299 CRK0299_NODE_40.ctg_1, whole genome shotgun sequence (17667 bp)
Overview 1 RT 1: 753-5418 bp Neighborhood of RT #1 [753, 5418] PRK15417 Arr-ms RVT-GII GIIM N6_acetyl_AAC6 Feature: gene Location: 753-1766 bp Feature: domain Description: PRK15417 Location: 756-1764 bp Feature: domain Description: PRK15417 Location: 756-1764 bp Feature: gene Location: 1723-2391 bp Feature: domain Description: Arr-ms Location: 1999-2305 bp Feature: domain Description: Arr-ms Location: 1999-2 305 bp Feature: gene Location: 2472-3725 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2664-3288 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 664-32 88 bp Feature: domain Description: GIIM Note: maturase Location: 3327-3546 bp Feature: domain Description: GIIM Note: maturase Location: 332 7-3546 bp Feature: gene Location: 4446-5000 bp Feature: domain Description: N6_acetyl_AAC6 Location: 4449-4998 bp Feature: domain Description: N6_acetyl_AAC6 Location: 4449-4998 bp Feature: gene Location: 4993-5418 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK15417 (integron integrase), Arr-ms (pfam12120), RVT-GII, GIIM (pfam08388), N6_acetyl_AAC6 (TIGR04431)