myRT

myRT report for GCA_002970405.2_ASM297040v2

Download annotations/find similar RTs

Seq: PVBD02000041.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0300 CRK0300_NODE_26.ctg_1, whole genome shotgun sequence (67920 bp)
Overview 1 RT 1: 39312-42387 bp Neighborhood of RT #1 [39312, 42392] PRK09678 RVT-UG11 SmpB PRK10724 Feature: gene Location: 39312-39530 bp Feature: domain Description: PRK09678 Location: 39315-39513 bp Feature: domain Description: PRK09678 Location: 3931 5-3951 3 bp Feature: gene Location: 39777-39965 bp Feature: gene Location: 39934-40707 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 40069-40522 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 40069-40522 bp Feature: gene Location: 41323-41805 bp Feature: domain Description: SmpB Location: 41353-41797 bp Feature: domain Description: SmpB Location: 41 353-41 797 bp Feature: gene Location: 41916-42392 bp Feature: domain Description: PRK10724 Location: 41922-42387 bp Feature: domain Description: PRK1 0724 Location: 41 922-42387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09678 (DNA-binding transcriptional regulator; Provisional), RVT-UG11, SmpB (pfam01668), PRK10724 (type II toxin-antitoxin system RatA family toxin)

Seq: PVBD02000005.1 Klebsiella pneumoniae subsp. pneumoniae strain CRK0300 CRK0300_NODE_73.ctg_1, whole genome shotgun sequence (1974 bp)
Overview 1 RT 1: 70-1609 bp Neighborhood of RT #1 [70, 1609] RVT-GII GIIM Feature: gene Location: 70-1425 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-988 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 364-988 bp Feature: domain Description: GIIM Note: maturase Location: 1027-1246 bp Feature: domain Description: GIIM Note: maturase Location: 102 7-12 46 bp Feature: gene Location: 1478-1609 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)