myRT

myRT report for GCA_002971005.1_ASM297100v1

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Seq: JZML01000002.1 Escherichia coli strain HT2012EP05 Scaffold2, whole genome shotgun sequence (569059 bp)
Overview 1 RT 1: 550299-555194 bp Neighborhood of RT #1 [550299, 555223] LomR RVT-GII GIIM RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 550299-551042 bp Feature: domain Description: LomR Location: 550311-551040 bp Feature: domain Description: LomR Location: 55031 1 -551 040 bp Feature: gene Location: 551352-551540 bp Feature: gene Location: 551723-552250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551729-551873 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 551 729-551 873 bp Feature: domain Description: GIIM Note: maturase Location: 551951-552173 bp Feature: domain Description: GIIM Note: maturase Location: 551 951 -5521 73 bp Feature: gene Location: 552251-552955 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552452-552950 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 552452-552950 bp Feature: gene Location: 553417-554856 bp Feature: domain Description: LZ_Tnp_IS66 Location: 553555-553780 bp Feature: domain Description: LZ_Tnp_IS66 Location: 553555-553780 bp Feature: domain Description: zf-IS66 Location: 553801-553933 bp Feature: domain Description: zf-IS66 Location: 553801 -553933 bp Feature: domain Description: DDE_Tnp_IS66 Location: 553978-554815 bp Feature: domain Description: DDE_Tnp_IS66 Location: 553978-55481 5 bp Feature: gene Location: 554876-555223 bp Feature: domain Description: TnpB_IS66 Location: 554903-555194 bp Feature: domain Description: TnpB_IS66 Location: 554903-5551 94 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LomR (COG3637), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)