myRT

myRT report for GCA_002971375.1_ASM297137v1

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Seq: JZMV01000053.1 Escherichia coli strain HT2012N08 NODE_57_length_12449_cov_48.934772, whole genome shotgun sequence (12513 bp)
Overview 1 RT 1: 6998-12148 bp Neighborhood of RT #1 [6998, 12148] proA PRK09692 RVT-UG7 Feature: gene Location: 6998-8251 bp Feature: domain Description: proA Location: 7025-8216 bp Feature: domain Description: proA Location: 7025-821 6 bp Feature: gene Location: 8606-9790 bp Feature: domain Description: PRK09692 Location: 8612-9767 bp Feature: domain Description: PRK09692 Location: 861 2-9767 bp Feature: gene Location: 9783-11411 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10191-10620 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 01 91 -1 0620 bp Feature: gene Location: 11408-12148 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7

Seq: JZMV01000008.1 Escherichia coli strain HT2012N08 NODE_9_length_4096_cov_345.626221, whole genome shotgun sequence (4160 bp)
Overview 1 RT 1: 1-2307 bp Neighborhood of RT #1 [1, 2307] CspC RVT-Retrons Feature: gene Location: 1-312 bp Feature: gene Location: 511-714 bp Feature: domain Description: CspC Location: 514-709 bp Feature: domain Description: CspC Location: 514-709 bp Feature: gene Location: 719-1858 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 863-1418 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 863-1418 bp Feature: gene Location: 1880-2062 bp Feature: gene Location: 2152-2307 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT CspC (COG1278), RVT-Retrons