myRT

myRT report for GCA_002971895.1_ASM297189v1

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Seq: JZOH01000037.1 Escherichia coli strain HT2012019 NODE_90_length_212268_cov_37.764568, whole genome shotgun sequence (212342 bp)
Overview 1 RT 1: 13840-17977 bp Neighborhood of RT #1 [13840, 17977] TnpB_IS66 LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 RVT-GII RVT-GII GIIM DDE_Tnp_IS66_C Feature: gene Location: 13840-14187 bp Feature: domain Description: TnpB_IS66 Location: 13867-14158 bp Feature: domain Description: TnpB_IS66 Location: 1 3867-1 41 58 bp Feature: gene Location: 14207-15646 bp Feature: domain Description: LZ_Tnp_IS66 Location: 14345-14570 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 4345-1 4570 bp Feature: domain Description: zf-IS66 Location: 14591-14723 bp Feature: domain Description: zf-IS66 Location: 1 4591 -1 4723 bp Feature: domain Description: DDE_Tnp_IS66 Location: 14768-15605 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 4768-1 5605 bp Feature: gene Location: 16108-16812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16309-16807 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6309-1 6807 bp Feature: gene Location: 16813-17340 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16819-16963 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 681 9-1 6963 bp Feature: domain Description: GIIM Note: maturase Location: 17041-17263 bp Feature: domain Description: GIIM Note: maturase Location: 1 7041 -1 7263 bp Feature: gene Location: 17456-17602 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 17468-17579 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 1 7468-1 7579 bp Feature: gene Location: 17810-17977 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TnpB_IS66 (pfam05717), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66_C (pfam13817)