myRT

myRT report for GCA_002971975.1_ASM297197v1

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Seq: JZOM01000004.1 Escherichia coli strain HT2012040 NODE_4_length_222399_cov_42.415321, whole genome shotgun sequence (222473 bp)
Overview 1 RT 1: 193585-198480 bp Neighborhood of RT #1 [193585, 198509] LomR RVT-GII GIIM RVT-GII LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 TnpB_IS66 Feature: gene Location: 193585-194328 bp Feature: domain Description: LomR Location: 193597-194326 bp Feature: domain Description: LomR Location: 1 93597-1 94326 bp Feature: gene Location: 194638-194826 bp Feature: gene Location: 195009-195536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195015-195159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 9501 5-1 951 59 bp Feature: domain Description: GIIM Note: maturase Location: 195237-195459 bp Feature: domain Description: GIIM Note: maturase Location: 1 95237-1 95459 bp Feature: gene Location: 195537-196241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 195738-196236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 95738-1 96236 bp Feature: gene Location: 196703-198142 bp Feature: domain Description: LZ_Tnp_IS66 Location: 196841-197066 bp Feature: domain Description: LZ_Tnp_IS66 Location: 1 96841 -1 97066 bp Feature: domain Description: zf-IS66 Location: 197087-197219 bp Feature: domain Description: zf-IS66 Location: 1 97087-1 9721 9 bp Feature: domain Description: DDE_Tnp_IS66 Location: 197264-198101 bp Feature: domain Description: DDE_Tnp_IS66 Location: 1 97264-1 981 01 bp Feature: gene Location: 198162-198509 bp Feature: domain Description: TnpB_IS66 Location: 198189-198480 bp Feature: domain Description: TnpB_IS66 Location: 1 981 89-1 98480 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LomR (COG3637), RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), TnpB_IS66 (pfam05717)